1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtatgatcgtgtgactctttgagctaatctctcttaggagtctttgagcatctattttaatgtttcatttttgtgttatgtgtttctcatctgttgcttgtctctgtgcagCCTCTTCAATCTATATAATCTGGTAGACCACCCAAATGCTCGTTTTCAAGTATACATGAAAGCTCTGGAACTGGCTGTAAACGGGAAGGTTACCGAGTAT
species | Arabidopsis thaliana |
transcript | AT5G15610.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GCTAAGGTTATTCAACAACCAAACGACAAAGCTTCATTGCGTTTGAAGAT CCTCTTCAATCTATATAATCTGGTAGACCACCCAAATGCTCGNTTTNAAGTEST: gi|164145090|gb|ES090928.1|ES090928
genomic: GCTAAGGTTATTCAACAACCAAACGACAAAGCTTCATTGCGTTTGAAGATgtatgatcgt ... ctctgtgcagCCTCTTCAATCTATATAATCTGGTAGACCACCCAAATGCTCGTTTTCAAGT
EST: TCAACAACCAAACGACAAAGCTTCATTGCGTTTGAAGAT CCTCTTCAATCTATATAATCTGGTAGACCACCCAAATGCTCGTTTTCAAGT
genomic: TCAACAACCAAACGACAAAGCTTCATTGCGTTTGAAGATgtatgatcgt ... ctctgtgcagCCTCTTCAATCTATATAATCTGGTAGACCACCCAAATGCTCGTTTTCAAGT
ttaatgtttcatttttgtgttatgtgtttctcatctgttgcttgtctctgtgcagCCTCTTCAATCTATATAATCTGGTAGACCACCCAAATGCTCGTTTTCAAGTATACATGAAAGCTCTGGAACTGGCTGTAAACGGGAAGGTTACCGAGTAT
ttttaat putative branch site (score: 3)
cttgtctct putative PPT
tttcattttt TA-rich tract