Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC

Basic information

species Arabidopsis thaliana
transcript AT4G31700.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: LOC_Os07g42950.1 (Oryza sativa), 3'ss of exon 3
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
              |    |  |  |  ||     || |    ||||   || |  ||    | | ||||||     |||   |     || |  ||||| ||||| || || || |||||||||| ||| ||||| || ||||| |||||||| ||||||||||||||  | ||| | || ||||| |||||| | |
-------------gtaatatcgtgaggcctctgatgtttcctaattactgttacctagtc--ttaagatgtta-acatatctctctcctttttctcagGAATTCAAGGGCTATGTCTTCAAGATCATGGGGGGTTGTGACAAGCAGGGTTTCCCTATGAAGCAGGGAGTGCTCACTGCTGGACGTGTCCGCCTTCTTC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: LOC_Os03g27260.1 (Oryza sativa), 3'ss of exon 3
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
       |    | |||   | |||| || | ||| | |  |  |  |  || | |   | ||||   |    ||  || |  |   ||||  | ||||| ||||| || || || |||||||||| ||| || || || |||||||||||||| ||||||||||| ||  | ||| | || ||||| |||||| | |
------gtaatttctttggcaatttgctcca-tgattcttcaact--gtcttgctattta-atga--gttggatgactaagtttgtctgtttgtacagGAATTCAAGGGCTATGTATTCAAGATCATGGGAGGCTGTGACAAGCAAGGTTTCCCCATGAAGCAGGGTGTGCTTACTTCTGGACGTGTCCGCCTTCTCC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GRMZM2G040600_T01 (Zea mays), 3'ss of exon 5
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtt-----tatgaattgttgtt----attgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
     || |  | ||| |  ||||||   | |    | |   |||       ||   || |||| | ||  ||   |     | |||  ||||  |     |||||||||||||| || || || |||||||||| |||||| || || |||||||| |||||||||||||| |||||||||||| | || |||||||||||| |||
-----gagttgaatttacaaactttgggatgacttatttcttgatccatgactctt-gctgatg-tcatacttaaatataggtgtgatatgttcctttgttttgcagGAGTTCAAGGGTTATGTCTTCAAGATCATGGGTGGATGTGACAAGCAAGGGTTCCCAATGAAGCAAGGAGTTTTGACTTCTGGTCGTGTTCGCCTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GRMZM2G054136_T09 (Zea mays), 3'ss of exon 3
gtacagattcc-atttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
||| |  ||   ||   |  |   |||||| |       ||  ||||  |||    ||  | | | || || | ||||| |   |||||    |||||||||||||| || || || |||||||||| |||||| || || |||||||| |||||||||||||| |||||||||||| | || |||||||| ||| |||
gtaaactttgggatgacttatttcttgatccatgactcttgctgattt-catacttaaatata-ggtg-tgatatgtttct---ttgtt----ttgcagGAGTTCAAGGGTTATGTCTTCAAGATCATGGGTGGATGTGACAAGCAAGGCTTCCCAATGAAGCAAGGAGTTTTGACTTCTGGTCGTGTTCGTCTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GRMZM2G054136_T08 (Zea mays), 3'ss of exon 3
-----------------gtacagattccatttttcttactttgatctaatgagtgtgaagattagc--atttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
                 |       |  | |||        | || |  |||      |   | ||  |||||  |    |  ||   | | || | |||  |  ||||| |||||||||||||| || || || |||||||||| |||||| || || |||||||| |||||||||||||| |||||||||||| | || |||||||| ||| |||
gtcagtggtgatgctctgggtgaggtaaactttggggtgacttatttcttgatccatgactcttgctgatttcatacttaaaaatataggtgtgat-atgtttctttgtt-ttgcagGAGTTCAAGGGTTATGTCTTCAAGATCATGGGTGGATGTGACAAGCAAGGCTTCCCAATGAAGCAAGGAGTTTTGACTTCTGGTCGTGTTCGTCTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GRMZM2G054136_T05 (Zea mays), 3'ss of exon 3
--gtacagattccatttttcttactttgatctaatgagtgtgaagattagc--atttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
  |       |  | |||        | || |  |||      |   | ||  |||||  |    |  ||   | | || | |||  |  ||||| |||||||||||||| || || || |||||||||| |||||| || || |||||||| |||||||||||||| |||||||||||| | || |||||||| ||| |||
ctgggtgaggtaaactttggggtgacttatttcttgatccatgactcttgctgatttcatacttaaaaatataggtgtgat-atgtttctttgtt-ttgcagGAGTTCAAGGGTTATGTCTTCAAGATCATGGGTGGATGTGACAAGCAAGGCTTCCCAATGAAGCAAGGAGTTTTGACTTCTGGTCGTGTTCGTCTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GRMZM2G054136_T01 (Zea mays), 3'ss of exon 3
gtacagattccatttttcttactt--tgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
||| |  ||     |  |||| ||  ||||| |       ||  ||||  |||    ||  | ||     || | ||||| |   |||||    |||||||||||||| || || || |||||||||| |||||| || || |||||||| |||||||||||||| |||||||||||| | || |||||||| ||| |||
gta-aactttggggtgacttatttcttgatccatgactcttgctgattt-catacttaaaaatataggtgtgatatgtttct---ttgtt----ttgcagGAGTTCAAGGGTTATGTCTTCAAGATCATGGGTGGATGTGACAAGCAAGGCTTCCCAATGAAGCAAGGAGTTTTGACTTCTGGTCGTGTTCGTCTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GRMZM5G851698_T02 (Zea mays), 3'ss of exon 3
gtacagattccatttttct-tactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
||| |  |||   |||  | |   |||||| | ||      |    |   |||||  |    || ||   | | ||   |||  ||  | || ||||||||||| || || || || |||||||||| |||||| || || || ||||| |||||||||||||| |||||| ||||| | || ||||| |||||| |||
gtaaattttctgctttcttatttcttgatcca-tgccccctattgctg--atttcatacttaattata--ggtgtg---atgtgtttctttt-ttgcagGAGTTTAAGGGTTATGTCTTCAAGATCATGGGTGGATGTGACAAACAAGGCTTCCCAATGAAGCAAGGAGTTCTGACTTCTGGTCGTGTCCGCCTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA13G24630.1 (Glycine max), 3'ss of exon 3
--------gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgt-tttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
        ||  || |   | | || |||  |  || | |   ||    |  ||||  |   |    |  | ||||| | ||    |||  |   ||| || || ||||||| |||||||| |||||||| ||||  ||||| || || || ||||| |||||||||||||||||||| ||||| || || |||||||| || ||||
gtatgtttgt-tagctggaaatcttattatatcaatgtcagttgttcctattttag-gtggagctttaattaatgatctattaacctatataactttgctactgaagGAGTTTAAAGGATATGTTTTCAAAATCACTGGTGGGTGTGACAAACAAGGATTCCCAATGAAGCAGGGAGTGTTGACCCCTGGTCGTGTTCGACTCTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA07G31840.3 (Glycine max), 3'ss of exon 2
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaag-----cagatgatgatgt-tttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
    |   ||  |   |   | | | ||   ||  ||||           ||| |  |      |    ||||| | ||    | |  |   |||  | || ||||||| |||||||| |||||||| ||||  ||||| || || || ||||| ||||| ||||||||||||||  |||| || || |||||||| |||||||
--gtatgctcgttagctggaaatcttattatatctgtgtctgttcctattttttgtggagcattaagaaatgatctattaacctctataactttgccactgaagGAGTTTAAAGGATATGTTTTCAAAATCACCGGTGGGTGTGACAAACAAGGATTCCCTATGAAGCAGGGAGTGCTGACCCCTGGTCGTGTTCGACTTTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA13G31130.1 (Glycine max), 3'ss of exon 4
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgtta-ttgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
|||  | ||    |    |   |      |   | || |   ||  | ||||    |     ||    | || |  || |    | ||| || |||||||| |||||||| || || ||||| || |  || |||||||| |||||||| || ||||||||||| ||||| ||||| || || ||||||||||| ||||
gtatggttttggctggaatccttccacagtgcagtgtttcctgagaaacattgatcaatgattggct-tattctccttttcttgttttgctacttgcagGAATTCAAAGGTTATGTCTTCAAAATTACTGGAGGTTGCGACAAGCAAGGATTTCCAATGAAGCAAGGAGTGTTGACCCCTGGTCGTGTTCGCCTCTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA15G08210.1 (Glycine max), 3'ss of exon 3
gtacagattccatttt--tcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatg----------aattgttgtta-ttgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
|||  | ||    |     | | |  |  |  |  |  |    |  ||| |  |  ||| ||       ||| || | ||||            ||  ||| || || ||||| |||||||| || || ||||| || |  || |||||||| |||||||| || ||||||||||| ||||| ||||| || || ||||||||||| ||||
gtatggtttttgctggaacccttccatagtgcagagtttcctgaagttacc--tgagaaacattgatcaatgattggcttatccgtcctttcttatatttgctacttacagGAATTCAAAGGCTATGTCTTCAAAATTACTGGAGGTTGCGACAAGCAAGGATTTCCAATGAAGCAAGGAGTGTTGACCCCTGGTCGTGTTCGCCTCTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA16G09330.1 (Glycine max), 3'ss of exon 1
-------gtacagattccatttttcttac-tttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
        |  ||||   |   |||  |   ||| |  |||   | |  ||   ||||||   ||  |  ||||  |||    ||||  |||| |  |  |   |||| || |||||||| || ||||| ||||  |||||||| || || ||||| || |||||||||||||||||  | || || ||| ||||||  |||||||
gtatgctctgtagatcaaaaccttcaaatacttgtttcaatatcttttgagg--agcattgataattat-tgatcttgtcaacttta-aaattatgctactaatagGAATTTAAAGGATATGTCTTCAAAATCACTGGTGGTTGTGACAAACAAGGATTTCCAATGAAGCAGGGAGTGCTAACACCTGGCTGTGTTCATCTTTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: Vv18s0001g06290.t01 (Vitis vinifera), 3'ss of exon 3
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
||| ||  |  |   || |||       | ||  | |   |  || ||    | ||   | || |  || | || ||  |   |||||  | |  ||||| || || || || || ||||| |||| ||| || || || |||||||| |||||||||||||||||||| || ||||| || |||||| | || ||||
gta-agcatttaccattgttatgcaatgccaa--aattctactatcaga--ctagatttatataac-atttatttttgtttgtttgtttgtgtgacagGAATTTAATGGCTATGTATTCAAAATCATGGGAGGCTGTGACAAGCAAGGGTTCCCAATGAAGCAGGGAGTGTTAACTCCTGGTCGTGTTAGTCTCTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: Vv07s0191g00060.t01 (Vitis vinifera), 3'ss of exon 3
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
        |    |||| ||||| |  |||  | ||   ||  | | ||  || |      |||||    |  ||| | | ||  ||  ||    ||||||||||| || || || ||||| || | ||| || || || ||||||||||| |||||||||||||||||  |||| |||||||| || |  ||| |||
-------gtatgattttgttactat--tcttcttag---gataacttgccctttgttaggaatgatttattgatgtatcttaagcgtgtttg--acagGAGTTCAAGGGTTATGTATTCAAAATAATGGGAGGCTGTGACAAGCAAGGTTTTCCAATGAAGCAGGGAGTACTGACCCCAGGCCGAGTCCAACTTCTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 3
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
        |     |||  | || |  ||  |    | |      ||   |||   | |   | || ||        | | |  || |    |  ||||||||||| || || ||||||||||||| ||||||||| || |||||||| || || ||||||||||||||  ||||||| ||||||||| | |||||||
-------gtatgccttttctgctcttctcccacttatttatctcatattgttt--gatctactaatcatacaaaacatgtcatctgct----tcacagGAGTTCAAGGGCTATGTTTTCAAGATCATGGGTGGTTGTGACAAGCAAGGGTTTCCCATGAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGC

upper sequence: AT4G31700.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: PP1S311_33V6.2 (Physcomitrella patens), 3'ss of exon 3
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC---------
                                                                        |   |  |||   |   ||  || | |||||||| ||||||||||||||||| | ||| || || || ||||| |||||||| ||||||||||| || ||||| |  || ||||| |  ||  ||          
-----------------------------------------------------------------------gtcagtggtgaccagc--ttggtg-atgagttcaagggatacgttttcaagattatgggaggatgtgacaagcagggtttccccatgaagCAGGGTGTCTTGACCCAGGGACGTGTGCAACTGCTGATGCACCGAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86037914|gb|DR333669.1|DR333669
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAAGATCAAGGGTGGTTGCGATAAGCAAGG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAA-GATCAAGGGTGGTTGCGATAAGCAAGG
EST: gi|86037920|gb|DR333675.1|DR333675
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037892|gb|DR333647.1|DR333647
EST:     CAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCRATAAGCAAGGT
genomic: CAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037899|gb|DR333654.1|DR333654
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037936|gb|DR333691.1|DR333691
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTT--AAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037896|gb|DR333651.1|DR333651
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037902|gb|DR333657.1|DR333657
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037894|gb|DR333649.1|DR333649
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|125233235|gb|EL247320.1|EL247320
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGAT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGAT
EST: gi|86037926|gb|DR333681.1|DR333681
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGG
EST: gi|86037951|gb|DR333706.1|DR333706
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037939|gb|DR333694.1|DR333694
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037901|gb|DR333656.1|DR333656
EST:     TTTACGACAAGAGAATCTCTCAATAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037925|gb|DR333680.1|DR333680
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGSAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037945|gb|DR333700.1|DR333700
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037952|gb|DR333707.1|DR333707
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037916|gb|DR333671.1|DR333671
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037923|gb|DR333678.1|DR333678
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037886|gb|DR333641.1|DR333641
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACTTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGG-
EST: gi|86037934|gb|DR333689.1|DR333689
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTT-GCCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|164183572|gb|ES055260.1|ES055260
EST:     GTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: GTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|124741334|gb|EH832496.1|EH832496
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTACAAAGATCAAGGGTGGTTGCGATAAGCAAG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTT-CAA-GATCAAGGGTGGTTGCGATAAGCAAG
EST: gi|86037919|gb|DR333674.1|DR333674
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037930|gb|DR333685.1|DR333685
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAANCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|116452354|gb|EG494946.1|EG494946
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037891|gb|DR333646.1|DR333646
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|47827913|gb|CK117597.1|CK117597
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037918|gb|DR333673.1|DR333673
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037921|gb|DR333676.1|DR333676
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037940|gb|DR333695.1|DR333695
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037947|gb|DR333702.1|DR333702
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037946|gb|DR333701.1|DR333701
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|116444032|gb|EG486624.1|EG486624
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCCGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAGGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037905|gb|DR333660.1|DR333660
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037943|gb|DR333698.1|DR333698
EST:     TTTACGASAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037884|gb|DR333639.1|DR333639
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037890|gb|DR333645.1|DR333645
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|124909261|gb|EH983341.1|EH983341
EST:     AATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: AATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037913|gb|DR333668.1|DR333668
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037948|gb|DR333703.1|DR333703
EST:     TTTACGACAAGAGAATCTCTCAATAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037887|gb|DR333642.1|DR333642
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATCCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|164008296|gb|ES044934.1|ES044934
EST:     GAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: GAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037908|gb|DR333663.1|DR333663
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037888|gb|DR333643.1|DR333643
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037907|gb|DR333662.1|DR333662
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037942|gb|DR333697.1|DR333697
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAA-GG
EST: gi|86037935|gb|DR333690.1|DR333690
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|164057032|gb|ES109500.1|ES109500
EST:     GAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: GAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037955|gb|DR333710.1|DR333710
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGAT--AGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|116396684|gb|EG439276.1|EG439276
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037917|gb|DR333672.1|DR333672
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|47830056|gb|CK119740.1|CK119740
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037927|gb|DR333682.1|DR333682
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037903|gb|DR333658.1|DR333658
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037931|gb|DR333686.1|DR333686
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037882|gb|DR333637.1|DR333637
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037954|gb|DR333709.1|DR333709
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|164020050|gb|EL972846.1|EL972846
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTG
EST: gi|86037950|gb|DR333705.1|DR333705
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATC
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATC
EST: gi|86037937|gb|DR333692.1|DR333692
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCKATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037900|gb|DR333655.1|DR333655
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037924|gb|DR333679.1|DR333679
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037941|gb|DR333696.1|DR333696
EST:     TTTACGACAAGAGAATCTCTCAGGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037933|gb|DR333688.1|DR333688
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAWGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037883|gb|DR333638.1|DR333638
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037906|gb|DR333661.1|DR333661
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037889|gb|DR333644.1|DR333644
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|164140760|gb|ES214712.1|ES214712
EST:     GTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: GTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037897|gb|DR333652.1|DR333652
EST:     TTTRGGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037932|gb|DR333687.1|DR333687
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037938|gb|DR333693.1|DR333693
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037909|gb|DR333664.1|DR333664
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037893|gb|DR333648.1|DR333648
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATGACGTTTTCAAGCATCAAGGGTGGTTGCGATAAGCAAG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGAT-ACGTTTTCAAG-ATCAAGGGTGGTTGCGATAAGCAAG
EST: gi|86037949|gb|DR333704.1|DR333704
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037953|gb|DR333708.1|DR333708
EST:     TTTACGACAARAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037912|gb|DR333667.1|DR333667
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037911|gb|DR333666.1|DR333666
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAAGG
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGC-AAGG
EST: gi|86037915|gb|DR333670.1|DR333670
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037928|gb|DR333683.1|DR333683
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037922|gb|DR333677.1|DR333677
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCRATAAGCAAGGT
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGT
EST: gi|86037885|gb|DR333640.1|DR333640
EST:     TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAG                         GAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGC
genomic: TTTACGACAAGAGAATCTCTCAAGAAGTCAGTGGAGATGCTTTGGGCGAGgtacagattc ... gttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

attagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC
                           ttttgtttatgaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtacagattccatttttcttactttgatctaatgagtgtgaagattagcatttcgaagcagatgatgatgttttgtttatgaattgttgttattgcagGAGTTCAAAGGATACGTTTTCAAGATCAAGGGTGGTTGCGATAAGCAAGGTTTCCCAATGAAGCAGGGAGTTTTGACTCCAGGCCGTGTTCGCCTTTTGC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC