1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaatggttaaacacaagcgttttttgctgagttccaactgtgcttggtttgttcaaggttactgactgtttgagtcacttttggcagAGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTGAGACCACCGAGCCTATTAGTTCAACTGCTATTAGTTCAACTGTTACATT
species | Arabidopsis thaliana |
transcript | AT4G22360.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAA AGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTGEST: gi|47828877|gb|CK118561.1|CK118561
genomic: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAAgtaatggtta ... cttttggcagAGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTG
EST: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAA AGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTGEST: gi|47830960|gb|CK120644.1|CK120644
genomic: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAAgtaatggtta ... cttttggcagAGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTG
EST: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAA AGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTGEST: gi|124723805|gb|EH815207.1|EH815207
genomic: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAAgtaatggtta ... cttttggcagAGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTG
EST: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAA AGGACTCTAGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGA
genomic: CAAGATGAATAAGTTGCTTGCTAAGCATATTCTCCCGCTTGATCCATCAAgtaatggtta ... cttttggcagAGGACTCT-GGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGA
tccaactgtgcttggtttgttcaaggttactgactgtttgagtcacttttggcagAGGACTCTGGTCAAGCAAAAAAGGCAAAAACTGAGGTGGAGACTAAGACTGAGACCACCGAGCCTATTAGTTCAACTGCTATTAGTTCAACTGTTACATT
tactgac putative branch site (score: 1)
tcactttt putative PPT