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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagattttttcctttaagagtaactcctctgtgtagagtccttttatctctgtcttaataactgttggcatgataaacacacagGGTTAAGTTGGATTCTGGAGAAGGCGAGTCGTGTAAGCGATGCAACTGCAAAAAGTCCAAGTGTTTGAAACT

Basic information

species Arabidopsis thaliana
transcript AT4G14770.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtgtagagtccttttatctctgtcttaataactgttggcatgataaacacacagGGTTAAGTTGGATTCTGGAGAAGGCGAGTCGTGTAAGCGATGCAACTGCAAAAAGTCCAAGTGTTTGAAACT
                          taataac  putative branch site (score: 1)
                       tcttaataa  TA-rich tract