1 5' 3' | 2 5' 3' | 3 5' 3' |
gtgtgaaaatactatccccctgtatatagatgcaatgtaggtagatgttagatatcaggtttgatatgttaacattcttgcagGGTGGAAAAGGTCGTTAACTCGTCGTCGATGGGTTCAAGAAACGAGTGAAACCGACGGGTTCGAATTTTGTAAGGCAAACAGTTTGTTTTGTTAGATTGT
species | Arabidopsis thaliana |
transcript | AT4G11240.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: TCCTAGACCAGGAACCCCACCTCATAAG GGTGGAAAAGGTCGTTAACTCGTCGTCGATGGGTTCAAGAAACGAGTGAAAEST: gi|86077523|gb|DR373280.1|DR373280
genomic: TCCTAGACCAGGAACCCCACCTCATAAGgtgtgaaaat ... attcttgcagGGTGGAAAAGGTCGTTAACTCGTCGTCGATGGGTTCAAGAAACGAGTGAAA
EST: GATTTGGATTCAACAACAATGTTCCTAGACCAGGAACCCCACCTCATAAG GGTGGAAAAGGTCGTTAACTCGTCGTCGATGGGTTCAAGAAACGAKTGAAA
genomic: GATTTGGATTCAACAACAATGTTCCTAGACCAGGAACCCCACCTCATAAGgtgtgaaaat ... attcttgcagGGTGGAAAAGGTCGTTAACTCGTCGTCGATGGGTTCAAGAAACGAGTGAAA
gatgcaatgtaggtagatgttagatatcaggtttgatatgttaacattcttgcagGGTGGAAAAGGTCGTTAACTCGTCGTCGATGGGTTCAAGAAACGAGTGAAACCGACGGGTTCGAATTTTGTAAGGCAAACAGTTTGTTTTGTTAGATTGT
tgttaac putative branch site (score: 2)
cattctt CT-rich tract
atatgttaa TA-rich tract