Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagttaaactttggtcgtttgatcaattatctttcatccttcgcagtattagaaaatgatgaaagacttgtgtaagagtgttttctctgtgtttggtttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAGCTTCTCTCCAACACGCTTTATTTCAAGCGGTTTTTCCCCTACTATGCCT

Basic information

species Arabidopsis thaliana
transcript AT3G60820.2
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT3G60820.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: Vv15s0048g00900.t01 (Vitis vinifera), 3'ss of exon 3
gtgagttaaactttggtcgtttgatcaattatctttcatccttcgcagtattagaaaatga-tgaaagacttgtgtaagagtgttt-tctctgtgtt-tggtttcctt-cagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAGCTTCTCTCCAACACGCTTTATTTCAAGCGGTTTTTCCCCTACTATGCCT
                || ||| ||   ||  | | ||    | | |    |  || |||| |||||    |   |     | ||| | | | | |  || |||  || ||||||||||| |||||||| |||||||||||||| || ||||||||||| || || ||||||||||| || || |  || || || ||||| || ||| | |
-----------cacaatc-tttcattgcttggcatccaaaaattgtaaagatgtaatatgaatgaaatgtctcattgcctttatttatttttatttcctgatttaattacagATCTATCAGCATCAGCACAACAAGCAGATGAGTTGCCCTGCAATGGCTCAACTGCTCTCCAACACCCTCTACTATAAACGTTTCTTCCCTTATTATTCTT

upper sequence: AT3G60820.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: PP1S197_22V6.2 (Physcomitrella patens), 3'ss of exon 4
gtgagttaaactttggt---cgtttgatcaattatctttcatccttcgcagtattagaaaatgatgaaagacttgtgtaagagtgttttctctgtgtttggtttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAGCTTCTCTCCAACACGCTTTATTTCAAGCGGTTTTTCCCCTACTATGCCT
  |     ||    | |   ||  || |     ||   ||     | |    ||||| | |   | | | |||   | |      ||| ||   ||| ||         |||| ||||| || |||||||||||||||||||||||||| || ||||| || || || || || || ||||| | |||||| || || ||||| || || |
--gtacagaatccagatactcgcgtgttggtgcattagtcgcttgtagagtaattagcagacattaagaaactgaagcat-----tttccttcatgtatg--------tagATTTATCAGCACCAGCATAACAAGCAGATGAGCTGTCCAGCTATGGCACAACTGCTTTCAAATACACTTTACTACAAGCGATTCTTTCCCTATTACGCAT

upper sequence: AT3G60820.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: PP1S54_196V6.2 (Physcomitrella patens), 3'ss of exon 4
--------gtgagttaaactttggtcgtttgatcaattatctttcatccttcgcagtattagaaaatgatgaa---agacttgtgtaagagtgtt--ttctctgt-gtttggtttcc------ttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAGCTTCTCTCCAACACGCTTTATTTCAAGCGGTTTTTCCCCTACTATGCCT
           || | |   |  ||   |  ||    ||  ||| |           | | ||| | | ||||   |   ||   |   | | ||  || | | |  |||||||  |      || |||| ||||| || ||||||| |||||||||||||||||| |||||||| ||||| || || || ||  | |||| |||||| ||||| || |||||| | |
gtacatactccaggttactgtgagtttgtaaattggctaattttgaagtgagaagcgacttgaagaagctgaatctatgtttaaatttaaattttagttatttattatttggttctccttgtgtttagATTTATCAGCACCAGCATAGCAAGCAGATGAGCTGTCCAGCAATGGCGCAGCTACTTTCAAATACTTTATATTACAAGCGATTTTTTCCGTACTATTCAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86020247|gb|DR315993.1|DR315993
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020231|gb|DR315977.1|DR315977
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020240|gb|DR315986.1|DR315986
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020259|gb|DR316005.1|DR316005
EST:     TCCAGGCTGATGTGAAAGCTT-GCAGAAGGTTCTCAAATCCAGWCACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCSCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020241|gb|DR315987.1|DR315987
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|163990881|gb|ES042285.1|ES042285
EST:     GGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATG
genomic: GGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATG
EST: gi|86020260|gb|DR316006.1|DR316006
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|164161450|gb|ES206196.1|ES206196
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         AATCTATCAACATCAGCATAACAAGCA
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagA-TCTATCAACATCAGCATAACAAGCA
EST: gi|86020257|gb|DR316003.1|DR316003
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020242|gb|DR315988.1|DR315988
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020253|gb|DR315999.1|DR315999
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020227|gb|DR315973.1|DR315973
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020263|gb|DR316009.1|DR316009
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020238|gb|DR315984.1|DR315984
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020249|gb|DR315995.1|DR315995
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020258|gb|DR316004.1|DR316004
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020267|gb|DR316013.1|DR316013
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020229|gb|DR315975.1|DR315975
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020239|gb|DR315985.1|DR315985
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCCA
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCC-A
EST: gi|86020248|gb|DR315994.1|DR315994
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020243|gb|DR315989.1|DR315989
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020234|gb|DR315980.1|DR315980
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020262|gb|DR316008.1|DR316008
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020255|gb|DR316001.1|DR316001
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|116445800|gb|EG488392.1|EG488392
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020245|gb|DR315991.1|DR315991
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020236|gb|DR315982.1|DR315982
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020244|gb|DR315990.1|DR315990
EST:     CCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: CC-AGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020254|gb|DR316000.1|DR316000
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020230|gb|DR315976.1|DR315976
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020246|gb|DR315992.1|DR315992
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020264|gb|DR316010.1|DR316010
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|164233976|gb|ES059122.1|ES059122
EST:     GGCTGATGTGAAAGC-TTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATG
genomic: GGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATG
EST: gi|86020265|gb|DR316011.1|DR316011
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020269|gb|DR316015.1|DR316015
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020261|gb|DR316007.1|DR316007
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020266|gb|DR316012.1|DR316012
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020233|gb|DR315979.1|DR315979
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020256|gb|DR316002.1|DR316002
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020232|gb|DR315978.1|DR315978
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020268|gb|DR316014.1|DR316014
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTWTCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020228|gb|DR315974.1|DR315974
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
EST: gi|86020252|gb|DR315998.1|DR315998
EST:     TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTG                         ATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG
genomic: TCCAGGCTGATGTGAAAGCTTTGCAGAAGGTTCTCAAATCCAGACACTTGgtgagttaaa ... tttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gaaaatgatgaaagacttgtgtaagagtgttttctctgtgtttggtttccttcagATCTATCAACATCAGCATAACAAGCAGATGAGCTGTCCTGCAATGGCCCAGCTTCTCTCCAACACGCTTTATTTCAAGCGGTTTTTCCCCTACTATGCCT
                                             tttccttc  CT-rich tract