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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgtgttgatagattcttgttatgcattgttaattgtgtatttggaattttgttttgagacttcagagtgtaattggttttgtatttgtattgcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT

Basic information

species Arabidopsis thaliana
transcript AT3G56340.1
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA05G21370.1 (Glycine max), 3'ss of exon 3
gtatgtgttgatagattcttgttatgcattgttaattgtgtatttggaattttgttttgagacttcagagtgtaattggttttgtatttgtattgc--attggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
|| | ||| || | || || | | | ||| ||| ||| || | | || | | || ||| || ||| |||| ||| |||| ||||| || || || || || | |||| |||||||||||| || ||||||||||||||||| |||||||| || ||||||||||| | | ||
----gtaataataattttcttacattcacctt--actctgttttttttttttcgtagaggaaactctca---cacctgttttggttttttaattgttaatttgtagAATACACGCTTCCGAAACTATATGTGAAGATGCAGTACTGTGTTTCCTGTGCTATCCATTCTCATGTTGTGAGGGTTCGATCCCGCACTGATAGGAGGAA

upper sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA14G38950.1 (Glycine max), 3'ss of exon 3
gtatgtgttgatagattcttgttatgcattgttaatt-gtgtattt----ggaattttgttttgagacttcagagtgtaattggttttgtatttgtattgc--attggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
| | || |||| | || || ||| | ||||| | || ||| | | | || || ||| |||| | ||| |||| || | || || || || ||||| || || | |||| |||||||||||| || ||||||||||| ||||| |||||||| || |||||||||||| || | ||
------------gtaattttcttatccgttatttatttatttatttttaggaaaatttcacatctgtttatgttgtttatttgtttttttttttaaattgtttatgtgcagAATATACACTTCCAAAACTCTATGTGAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACCGACAGGAGGAA

upper sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA17G18200.1 (Glycine max), 3'ss of exon 3
-------------------------------------------------------------------gtatgtgttgatagat--tcttgttatgcattgttaattgtgtatttggaattttgttttgagacttcag-----agtgtaattggttt---tgtatttgtattgc--attggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
| | ||| | | | | | |||||| | | |||| ||| | ||||| | | | | || | ||||| ||| ||| ||| ||| |||| ||| |||| ||||| || || || || || | |||| |||||||||||| || ||||||||||| ||||| |||||||| || ||||||||||| || | ||
gtaataataattttcttatatttaccttcttaaaaggaaaatttcacacctgtgttgttttttatcggcaaatgtagtttgttagttttgtta-gaaatgttgcttgaggatttgaacctctccctcctccctcttgttagaagtgttatttatttcgttgttttttaattgttgatttgtagAGTACACGCTTCCGAAACTCTATGTGAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGACAGGAGGAA

upper sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA02G40660.1 (Glycine max), 3'ss of exon 3
gtatgtgttgatagattcttgttatgcattgttaattgtgta--tttggaattttgttttgagacttcagagtgtaattggttttgtatttgtattgcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
|| || | | | | || | || | ||| | || | || || | || |||| || || | |||| ||| || || ||||| || || || || | |||| |||||||||||| || ||||||||||| ||||| |||||||| || ||||||||||| || | ||
----------gtaactttctaattcgttatttttttcatgaaaatttcgcatctgtttatgttattt--atttgtattt---ttaaaaaaaatattattttg-cagAATATACTCTTCCGAAACTCTATGTGAAGATGCAGTACTGTGTTTCTTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGACAGGAGGAA

upper sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA04G39940.1 (Glycine max), 3'ss of exon 3
gtatgtgttgatagattcttgttatgcattgttaattgtgtatttggaattttgttttgagacttcagagtgtaattggttttgtatttgtattgc-attggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
|| || | | | || || | | ||| |||| || | ||| || | ||| ||| || ||| |||| ||| |||| ||||| || || ||||| || | |||| |||||| ||||| || ||||||||||| ||||| |||||||| || ||||||||||| | | |||
----------gtaattttcttcttcttttcttttcttttcttttttctttttttgcaggaaaattccacgtcttatttatttggtttttaaattgttatttgtagAATACACGCTTCCGAAGCTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGATAGGAGAAA

upper sequence: AT3G56340.1 (Arabidopsis thaliana), 3'ss of exon 3
lower sequence: GLYMA06G14950.1 (Glycine max), 3'ss of exon 3
gtatgtgttgatagattcttgttatgcattgttaattgtgtatttggaattttgtttt--gagacttcagagtgtaattggttttgtatttgta--ttgc--attggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
| | || || | | || | | | | || ||||||| | |||| ||| || ||| |||||| ||| | ||| ||| |||| ||||| || || |||||||| | |||| |||||| ||||| || ||||||||||| ||||| |||||||| || ||||||||||| | | |||
------------gtaattttcttcttctttacctttcttttttctgtttttttgttgtaggagaattccacgtcctatttattttgttttttgaatttgttaatttgtagAATACACGCTTCCGAAGCTTTATGTGAAGATGCAGTATTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGATAGGAGAAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86017121|gb|DR312867.1|DR312867
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAK-ACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017108|gb|DR312854.1|DR312854
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017115|gb|DR312861.1|DR312861
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017144|gb|DR312890.1|DR312890
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017138|gb|DR312884.1|DR312884
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017097|gb|DR312843.1|DR312843
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017140|gb|DR312886.1|DR312886
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017117|gb|DR312863.1|DR312863
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017142|gb|DR312888.1|DR312888
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116478543|gb|EG521135.1|EG521135
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017123|gb|DR312869.1|DR312869
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017120|gb|DR312866.1|DR312866
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116475477|gb|EG518069.1|EG518069
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|152034061|gb|BP866502.2|BP866502
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017129|gb|DR312875.1|DR312875
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017139|gb|DR312885.1|DR312885
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|164111996|gb|ES082323.1|ES082323
EST:     GCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: GCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|124887334|gb|EH966236.1|EH966236
EST:     AGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: AGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017109|gb|DR312855.1|DR312855
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017148|gb|DR312894.1|DR312894
EST:     GTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCMWAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTSTCGTGTG
genomic: GTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCT-AGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017096|gb|DR312842.1|DR312842
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|47831534|gb|CK121218.1|CK121218
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017150|gb|DR312896.1|DR312896
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTTACGCTAAGACGCAGTACTGTGTCTCGTGT
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTT-ACGCTAAGACGCAGTACTGTGTCTCGTGT
EST: gi|47829422|gb|CK119106.1|CK119106
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|164131357|gb|ES010435.1|ES010435
EST:     GGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: GGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86076083|gb|DR371840.1|DR371840
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017124|gb|DR312870.1|DR312870
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017132|gb|DR312878.1|DR312878
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017130|gb|DR312876.1|DR312876
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017110|gb|DR312856.1|DR312856
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAK-ACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86081497|gb|DR377254.1|DR377254
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|47830238|gb|CK119922.1|CK119922
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|47829771|gb|CK119455.1|CK119455
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017125|gb|DR312871.1|DR312871
EST:     TGTTGAGCAGGCTGCTATTAAAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116469688|gb|EG512280.1|EG512280
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017099|gb|DR312845.1|DR312845
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAK-ACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|152038413|gb|AV822242.2|AV822242
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017128|gb|DR312874.1|DR312874
EST:     TGTTGAGCAGGCTGCTATTAGAGATGYTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAMGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116445932|gb|EG488524.1|EG488524
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017116|gb|DR312862.1|DR312862
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017145|gb|DR312891.1|DR312891
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017137|gb|DR312883.1|DR312883
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017112|gb|DR312858.1|DR312858
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|163997812|gb|ES100280.1|ES100280
EST:     GAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: GAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017114|gb|DR312860.1|DR312860
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017118|gb|DR312864.1|DR312864
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017141|gb|DR312887.1|DR312887
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017111|gb|DR312857.1|DR312857
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017107|gb|DR312853.1|DR312853
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017131|gb|DR312877.1|DR312877
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGKGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017095|gb|DR312841.1|DR312841
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017146|gb|DR312892.1|DR312892
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017136|gb|DR312882.1|DR312882
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017102|gb|DR312848.1|DR312848
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86077122|gb|DR372879.1|DR372879
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116429180|gb|EG471772.1|EG471772
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017143|gb|DR312889.1|DR312889
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAKTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017098|gb|DR312844.1|DR312844
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017135|gb|DR312881.1|DR312881
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116399767|gb|EG442359.1|EG442359
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017101|gb|DR312847.1|DR312847
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|116437428|gb|EG480020.1|EG480020
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017106|gb|DR312852.1|DR312852
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017119|gb|DR312865.1|DR312865
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017149|gb|DR312895.1|DR312895
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017104|gb|DR312850.1|DR312850
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017134|gb|DR312880.1|DR312880
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017127|gb|DR312873.1|DR312873
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017147|gb|DR312893.1|DR312893
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|152035106|gb|BP844740.2|BP844740
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017113|gb|DR312859.1|DR312859
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
EST: gi|86017133|gb|DR312879.1|DR312879
EST:     TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAG                         GTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG
genomic: TGTTGAGCAGGCTGCTATTAGAGATGTTCAAGAAGCTAGCGTCTACGAAGgtatgtgttg ... gcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttgttttgagacttcagagtgtaattggttttgtatttgtattgcattggtagGTTACACTCTCCCAAAGCTTTACGCTAAGACGCAGTACTGTGTCTCGTGTGCTATCCATTCTCACGTTGTGAGAGTCCGATCCCGCACCAACCGTAGAGT
                              ttttgtatttgtatt  TA-rich tract