1 5' 3' | 2 5' 3' | 3 5' 3' |
gtaagcacacacaacaacttacctttcttgatcaaacttatgtacaaatgtatatctaatgttggtgttttttgcttggtgggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTACCCGGGGACAGGACCATTGGAGAACTTGGCAACTCACTTGGCGGATCC
species | Arabidopsis thaliana |
transcript | AT3G54890.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124835198|gb|EH919637.1|EH919637
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGEST: gi|125186220|gb|EL201174.1|EL201174
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGG
EST: GAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|47830870|gb|CK120554.1|CK120554
genomic: GAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125184563|gb|EL199517.1|EL199517
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: AAGGACCCCAAGAAGCTTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|124747365|gb|EH837501.1|EH837501
genomic: AAGGACCCCAAGAAGC-TCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: TTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125045512|gb|EL117781.1|EL117781
genomic: TTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: CGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124761582|gb|EH851712.1|EH851712
genomic: CGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: CCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|86086649|gb|DR382408.1|DR382408
genomic: CCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125000022|gb|EL072291.1|EL072291
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTAGTTGGCGTTTGTAGGATTCTGTGTGCAEST: gi|124775424|gb|EH865553.1|EH865553
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCT-GTTGGCGTTTGTAGGATTCTGTGTGCA
EST: CGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125127133|gb|EL172138.1|EL172138
genomic: CGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|116462163|gb|EG504755.1|EG504755
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124827677|gb|EH912543.1|EH912543
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGEST: gi|124855050|gb|EH939487.1|EH939487
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|125104473|gb|EL158540.1|EL158540
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGEST: gi|116462155|gb|EG504747.1|EG504747
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|47828067|gb|CK117751.1|CK117751
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125138923|gb|EL177963.1|EL177963
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: AGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124777178|gb|EH867121.1|EH867121
genomic: AGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: CGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|164061390|gb|EL994566.1|EL994566
genomic: CGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGA-CCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGEST: gi|124938334|gb|EL014974.1|EL014974
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTG
EST: TCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|47829843|gb|CK119527.1|CK119527
genomic: TCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|116467732|gb|EG510324.1|EG510324
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|47830877|gb|CK120561.1|CK120561
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124785957|gb|EH875636.1|EH875636
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAGATCAAGAACG GGCGGCCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTEST: gi|125294374|gb|EL308459.1|EL308459
genomic: GAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGG-CTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: AAGGACCCCAAGAAGTCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGEST: gi|124869959|gb|EH954396.1|EH954396
genomic: AAGGACCCCAAGAAG-CTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG
EST: CGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTEST: gi|125104826|gb|EL158783.1|EL158783
genomic: CGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGAEST: gi|116462140|gb|EG504732.1|EG504732
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGA
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGGCGTTTGTAGGATTCTGTGTGCAACGGTCGGCTEST: gi|124980693|gb|EL053626.1|EL053626
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGG-CGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|124736222|gb|EH827624.1|EH827624
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: AGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTTTGTGTGCAACAGTCGGCTTEST: gi|124798217|gb|EH887896.1|EH887896
genomic: AGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGEST: gi|125024841|gb|EL097110.1|EL097110
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATEST: gi|125121163|gb|EL168511.1|EL168511
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGAT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|125182042|gb|EL197816.1|EL197816
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: AAGGACCCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAEST: gi|124979032|gb|EL052134.1|EL052134
genomic: AAGGA-CCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCA
EST: TGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGTCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTEST: gi|124929837|gb|EL007348.1|EL007348
genomic: TGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTG-CGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: AGAAGCTCGAGGAATTGAAAGTTAAAGAGATTCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTEST: gi|116467731|gb|EG510323.1|EG510323
genomic: AGAAGCTCGAGGAATTGAAAGTTAAAGAGA-TCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125086078|gb|EL145678.1|EL145678
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGEST: gi|124881206|gb|EH960108.1|EH960108
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCG
EST: TTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125311985|gb|EL326070.1|EL326070
genomic: TTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGEST: gi|47829827|gb|CK119511.1|CK119511
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|116462154|gb|EG504746.1|EG504746
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTEST: gi|124827119|gb|EH911985.1|EH911985
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTT
EST: GATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124937736|gb|EL014447.1|EL014447
genomic: GATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124737563|gb|EH828965.1|EH828965
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTEST: gi|125137568|gb|EL177423.1|EL177423
genomic: GGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGC-TTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: GAAGGA-CCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGEST: gi|124730373|gb|EH821775.1|EH821775
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|124727024|gb|EH818426.1|EH818426
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: AGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125033491|gb|EL105760.1|EL105760
genomic: AGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAAEST: gi|125223433|gb|EL237518.1|EL237518
genomic: GCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAA
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGEST: gi|125309887|gb|EL323972.1|EL323972
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGEST: gi|124792138|gb|EH881817.1|EH881817
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTG
EST: AAAGAGATCAAGGACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125115010|gb|EL165183.1|EL165183
genomic: AAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTEST: gi|125216883|gb|EL230966.1|EL230966
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCATGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAAGGATTCTGTGTGCAACAGTCGGCTEST: gi|125274510|gb|EL288595.1|EL288595
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTA-GGATTCTGTGTGCAACAGTCGGCT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGEST: gi|125318770|gb|EL332855.1|EL332855
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCG
EST: AAGGA-CCCAAGAAGTCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAAEST: gi|125010317|gb|EL082586.1|EL082586
genomic: AAGGACCCCAAGAAG-CTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAA
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|124979482|gb|EL052524.1|EL052524
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAEST: gi|116431573|gb|EG474165.1|EG474165
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTA
EST: CAATGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|47831075|gb|CK120759.1|CK120759
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124763670|gb|EH853800.1|EH853800
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGEST: gi|125251621|gb|EL265706.1|EL265706
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCG
EST: AAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125244764|gb|EL258849.1|EL258849
genomic: AAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGEST: gi|125290263|gb|EL304348.1|EL304348
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGEST: gi|125028084|gb|EL100353.1|EL100353
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGEST: gi|124904272|gb|EH978352.1|EH978352
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGEST: gi|116462164|gb|EG504756.1|EG504756
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTATGATTCTGTGTGCAACAGTCGGCTTEST: gi|125093958|gb|EL151497.1|EL151497
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: AGCTCGAGGAATTGAAAGTTAAAGAGATCTAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTEST: gi|125015770|gb|EL088039.1|EL088039
genomic: AGCTCGAGGAATTGAAAGTTAAAGAGATC-AAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCT
EST: GCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|124845194|gb|EH929631.1|EH929631
genomic: GCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: AAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|124727921|gb|EH819323.1|EH819323
genomic: AAGGACCCCAAGAAGCTCGAGGAATTGAAAG-TTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: TCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125138440|gb|EL177822.1|EL177822
genomic: TCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: AAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125045383|gb|EL117652.1|EL117652
genomic: AAGGACCCCAAGAAGCTCGAGGAATTGAAAG-TTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: AGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGEST: gi|124760912|gb|EH851042.1|EH851042
genomic: AGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG
EST: GGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGACAACAGTCGGEST: gi|116462138|gb|EG504730.1|EG504730
genomic: GGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG-CAACAGTCGG
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACGGTCGGCTTEST: gi|124823269|gb|EH908135.1|EH908135
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGEST: gi|124930684|gb|EL008111.1|EL008111
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTG
EST: GAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125139662|gb|EL178312.1|EL178312
genomic: GAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGEST: gi|125019780|gb|EL092049.1|EL092049
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCG
EST: GAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTEST: gi|125039122|gb|EL111391.1|EL111391
genomic: GAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|125107925|gb|EL161052.1|EL161052
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: GAAGGACCCCAAGAAGCTCGAGGAATTG-AAGTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGTTGGCGTTTGTAGGATTEST: gi|124808281|gb|EH894485.1|EH894485
genomic: GAAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTAAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATT
EST: AAGGACCCCAAGAAGCTCGAGGAATTGAAAGTTTAAAGAGATCAAGAACG GGCGGCTTGCGCTGT
genomic: AAGGACCCCAAGAAGCTCGAGGAATTGAAAGTT-AAAGAGATCAAGAACGgtaagcacac ... ggtgtaacagGGCGGCTTGCGCTGT
cttatgtacaaatgtatatctaatgttggtgttttttgcttggtgggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTACCCGGGGACAGGACCATTGGAGAACTTGGCAACTCACTTGGCGGATCC
atctaat putative branch site (score: 3)
aaatgtatatctaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagcacacacaacaacttacctttcttgatcaaacttatgtacaaatgtatatctaatgttggtgttttttgcttggtgggtgtaacagGGCGGCTTGCGCTGTTGGCGTTTGTAGGATTCTGTGTGCAACAGTCGGCTTACCCGGGGACAGGACCATTGGAGAACTTGGCAACTCACTTGGCGGATCC
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