1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtaagatctatgctttccttttgctttttcttattagttctttgtccatagagatgttatgtttatagtcttggatctgacgaatgtttcttctgcagGAAAAAGTCCATGTTTCCCCCGTTTGAGTCTGCGGAAACTCGTACTCTCGCTGAGAGTTTGAGTAG
species | Arabidopsis thaliana |
transcript | AT2G34560.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GATGGTAACACAGCCTTGGCCAATGGCAATGTGATTCGCGAGAAGCC GAAAAAGTCCATGTTTCCCCCGTTTGAGTCTGCGGAAACTCGEST: gi|124851477|gb|EH935914.1|EH935914
genomic: GATGGTAACACAGCCTTGGCCAATGGCAATGTGATTCGCGAGAAGCCgtaagatcta ... tcttctgcagGAAAAAGTCCATGTTTCCCCCGTTTGAGTCTGCGGAAACTCG
EST: AGGATGGTAACACAGCCTTGGCCAATGGCAATGTGATTCGCGAGAAGCC GAAAAAGTACCATGTTTCCCCCGTTTGAGTCTGCGGAAACTCGTAC
genomic: AGGATGGTAACACAGCCTTGGCCAATGGCAATGTGATTCGCGAGAAGCCgtaagatcta ... tcttctgcagGAAAAAGT-CCATGTTTCCCCCGTTTGAGTCTGCGGAAACTCGTAC
gtccatagagatgttatgtttatagtcttggatctgacgaatgtttcttctgcagGAAAAAGTCCATGTTTCCCCCGTTTGAGTCTGCGGAAACTCGTACTCTCGCTGAGAGTTTGAGTAG
atctgac putative branch site (score: 3)
tgtttcttct putative PPT
atgttatgtttata TA-rich tract