1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaaatattagtcattttcatctgtattttcctccggcgtttcatagttataatctttgaataatccgttcgtttgtgattgacatattatattatgtagGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTCAACAACAGACAGTACCGAG
species | Arabidopsis thaliana |
transcript | AT2G14740.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CTGACTTGG-CAATCCAGTTCTTAAGGAAGAACAAGATGCTCAA GTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGC-TACCTTGGTTGTCEST: gi|164179435|gb|ES183814.1|ES183814
genomic: CTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGATGCTCAAgtaaatatta ... tattatgtagGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTC
EST: CTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGATGCTCAA GTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTAGCCTACCTTGGTTGTEST: gi|125279153|gb|EL293238.1|EL293238
genomic: CTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGATGCTCAAgtaaatatta ... tattatgtagGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATT-GCCTACCTTGGTTGT
EST: TGCTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGATGCTCAA GTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTC
genomic: TGCTGACTTGGACAATCCAGTTCTTAAGGAAGAACAAGATGCTCAAgtaaatatta ... tattatgtagGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTC
agttataatctttgaataatccgttcgtttgtgattgacatattatattatgtagGTTGGCAAGGGTTCAAGGGGTGATGTTACCATATTGCCTACCTTGGTTGTCAACAACAGACAGTACCGAG
gattgac putative branch site (score: 3)
attgacatattatatt TA-rich tract