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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaatgttgaagctggtttaccttcttctcccttatgagcatcacagttccaaacaagtttactcacattcctcttttcgttatgcagGCTCTGACAGTGATAGCTCAGGACATGAATCTGATACCGGTAATTAACCACGATTGTGAAAGTATTTAGCATAGGTGGGAGCCATCGTGGTGTCAACTTC

Basic information

species Arabidopsis thaliana
transcript AT1G73150.1
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatgagcatcacagttccaaacaagtttactcacattcctcttttcgttatgcagGCTCTGACAGTGATAGCTCAGGACATGAATCTGATACCGGTAATTAACCACGATTGTGAAAGTATTTAGCATAGGTGGGAGCCATCGTGGTGTCAACTTC
                           tactcac  putative branch site (score: 1)
                         tttactcacattcctc  CT-rich tract
                      aagttta  TA-rich tract