1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagttttgcatctcctttcttaggtctttatttctttgtgaacttctttagcttatcttccttctcatgcgcccctctatttgatgaagtagtttacttgaatttgatgtttttgccatgttgcagGACAGTGAACCAGATATCATTGATGGAGTTGGTGCAGAACCTGGCCATGTGATCACAACTACACTCCCTGGACGAAATGGTCAATCAAGACAG
species | Arabidopsis thaliana |
transcript | AT1G57870.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ATATGCTTGAGATGAAGATAAGGGACAAGACAGAGGCTGATGAGGAGAGA GACAGTGAACCAGATATCATTGATGGAGTTGGTGCAGAACCTGGCCATGTGEST: gi|86072753|gb|DR368510.1|DR368510
genomic: ATATGCTTGAGATGAAGATAAGGGACAAGACAGAGGCTGATGAGGAGAGAgtaagttttg ... catgttgcagGACAGTGAACCAGATATCATTGATGGAGTTGGTGCAGAACCTGGCCATGTG
EST: ATATGCTTGAGATGAAGATAAGGGACAAGACAGAGGCTGATGAGGAGAGA GACAGTGAACCAGATATCNNNTGATGGGGTTGGTGCAGAACCTGGCCATGT
genomic: ATATGCTTGAGATGAAGATAAGGGACAAGACAGAGGCTGATGAGGAGAGAgtaagttttg ... catgttgcagGACAGTGAACCAGATATCAT-TGATGGAGTTGGTGCAGAACCTGGCCATGT
cccctctatttgatgaagtagtttacttgaatttgatgtttttgccatgttgcagGACAGTGAACCAGATATCATTGATGGAGTTGGTGCAGAACCTGGCCATGTGATCACAACTACACTCCCTGGACGAAATGGTCAATCAAGACAG
atttgat putative branch site (score: 5)
tttttgcc CT-rich tract
aatttgatgttttt TA-rich tract