1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaagttttcaaacttgtcaaggtttactggttttctcttcagtatttgtgctccctaatactcttgtttcgcagGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGATATTGGAAAGTTGGACCATTTAAGGCTTTT
species | Arabidopsis thaliana |
transcript | AT1G31420.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AACTGGAACGGAGTGACACGTGATGCAAAAACGAAAAGAGTTATAACCTT GAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCCGATATTGGAAAEST: gi|116419338|gb|EG461930.1|EG461930
genomic: AACTGGAACGGAGTGACATGTGATGCAAAAACGAAAAGAGTTATAACCTTgtaagttttc ... tgtttcgcagGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGATATTGGAAA
EST: AACTGGAACGGAGTGACATGTGATGCAAAAACGAAAAGAGTTATAACCTT GAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGATATTGGAAA
genomic: AACTGGAACGGAGTGACATGTGATGCAAAAACGAAAAGAGTTATAACCTTgtaagttttc ... tgtttcgcagGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGATATTGGAAA
aggtttactggttttctcttcagtatttgtgctccctaatactcttgtttcgcagGAATCTTACTTATCACAAAATAATGGGACCTTTACCTCCTGATATTGGAAAGTTGGACCATTTAAGGCTTTT
ccctaat putative branch site (score: 3)
ctcttgtttc CT-rich tract
agtattt TA-rich tract