1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtacttattctttgccataacaaagacaaatctacgtgaatagagttggtagtgttaatgatgtttttttattcatctactgaagGCACGTAGAGCATTTCGAACTCTTAAAGGTATCATCAGGCTGCAGGCAGTTATCCGTGGTCACTTGGTGAGAAGACAAGCCATTGCTACATATTCATGTA
species | Arabidopsis thaliana |
transcript | AT1G14380.1 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGCTTGAACAAGCTGCAATTAAGGTTCAAGTTNCCTTCAGAGCTCATCAG GCACGTAGAGCATTTCGAACTCTTAAAGGTATCATCAGGCTGCAGGCAGTTEST: gi|164133879|gb|ES011689.1|ES011689
genomic: AGCTTGAACAAGCTGCAATTAAGGTTCAAGCTACCTTCAGAGCTCATCAGgtacttattc ... tctactgaagGCACGTAGAGCATTTCGAACTCTTAAAGGTATCATCAGGCTGCAGGCAGTT
EST: AGCTTGAACAAGCTGCAATTAAGGTTCAAGCTACCTTCAGAGCTCATCAG GCACGTAGAGCATTTCGAACTCTTAAAGGTATCA
genomic: AGCTTGAACAAGCTGCAATTAAGGTTCAAGCTACCTTCAGAGCTCATCAGgtacttattc ... tctactgaagGCACGTAGAGCATTTCGAACTCTTAAAGGTATCA
tctacgtgaatagagttggtagtgttaatgatgtttttttattcatctactgaagGCACGTAGAGCATTTCGAACTCTTAAAGGTATCATCAGGCTGCAGGCAGTTATCCGTGGTCACTTGGTGAGAAGACAAGCCATTGCTACATATTCATGTA
tgttaat putative branch site (score: 3)
tttttttattcatct putative PPT
ttaatgatgttttttt TA-rich tract