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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgtctaatatccacaacgttttcttttctttgggaataatatttaacttgaagagattgtgatgttcttgttcgttttctgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT

Basic information

species Arabidopsis thaliana
transcript AT5G64040.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT5G64040.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: LOC_Os12g08770.1 (Oryza sativa), 3'ss of exon 2
-------------------------------------------------------------------gtttgtctaatatccacaac-gttttcttttctttgggaataatatttaacttgaagagattgtgatgttcttgttcgttttctgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTT-TGT
                                                                   |  ||| | | ||| | |   | ||  |||| | ||| |  || |       || |    ||    ||       | || || |    |||||||||| ||||| |||||||| ||| | |   | || ||||| || ||||| ||||||||||| || ||||| || ||||||||||||||| || ||  || 
gtctcatcacttcattactttcacaaattccactctcttcatcctatcaaaaaccaaacctcgttcaggatgtatcacatctatactagattggttttttatggaacgaacaagagtactgcatgatttaatctgaaacctcttgtgttgttgcgtgcagAAAGTCCCATTCATCTCAGATGATCTCGAGATCGAGTGCGAGGGGAAGGAGAAGTACAAGTGCGGATCCAACGTCTTCTGGAAATGGTGATGATCTGATG-

upper sequence: AT5G64040.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA06G15540.1 (Glycine max), 3'ss of exon 2
----------------------------gtttgtctaatatccacaacgttttctt---ttctttgggaataatatttaact-tgaagagattgtgatgttc--ttgttcgttt-------tctgttt-tgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT
                            | ||  | ||  || |   | |  ||||   || ||       | || |||| | | | |   ||||  | ||    || ||||||       | | |||  ||||||||| |||||  |    || ||| | |   | ||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||         
gtctagctctacctctgatatttcacttgctttcccaaattctaactcttgctcttgcctttttctaattcagtaattaattctcatgctgttgtacttttgggctggtcgtttctgggattttatttacgcagAAAGTGCCATTCCTTAGTGACGATTTGGAGCTTGAATGCGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGAAAGGAGGCAA

upper sequence: AT5G64040.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA04G39370.5 (Glycine max), 3'ss of exon 2
----------------------------------------------------gtttgtctaatatccacaacgttttcttttctttgggaataatatttaacttgaagagattgtgatgttc-ttgttcgttttctgttt-tgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT
                                                      ||| ||  |    |    ||  |  |     ||    |  | |||    |       || |  | ||| ||  | | ||| | | |  ||||||||| |||||  |    || ||  | |   | ||||| ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||         
gtctagctccacctctgatatttcacttgctttcccaaatcctaactcttgcacttgcctttttctaattcagtaattctcatgctgttgttcttttttcttcttttttttttctccttttcgtttctgggtttttatctacgcagAAAGTGCCATTCCTTAGTGACGACTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGAAAGGAGGCAA

upper sequence: AT5G64040.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA04G39370.1 (Glycine max), 3'ss of exon 2
----------------------------------------------------gtttgtctaatatccacaacgttttcttttctttgggaataatatttaacttgaagagattgtgatgttc-ttgttcgttttctgttt-tgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT----
                                                      ||| ||  |    |    ||  |  |     ||    |  | |||    |       || |  | ||| ||  | | ||| | | |  ||||||||| |||||  |    || ||  | |   | ||||| ||||| |||||||| |||||||| ||||| ||||||||||||||||||||||             
gtctagctccacctctgatatttcacttgctttcccaaatcctaactcttgcacttgcctttttctaattcagtaattctcatgctgttgttcttttttcttcttttttttttctccttttcgtttctgggtttttatctacgcagaaagTGCCATTCCTTAGTGACGACTTGGAGCTTGAATGTGAAGGAAAGGACAAATACAAGTGCGGTTCTAATGTTTTCTGGAAATGGTGAAAGGAGGCAACATT

upper sequence: AT5G64040.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: Vv04s0044g01410.t01 (Vitis vinifera), 3'ss of exon 2
gtttgtctaatatccacaac--gttttcttttctttgggaataatatttaacttgaagagattgtga-tgttcttgttcgttttctgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT
||    |  |||  | ||||   | | || |  |||   | |  |||| |   ||| ||   | | | || | || |||  |||   |  |||||||||| || ||  | || |||||| | |  ||||| || ||||| | ||||||||||||||| ||||||||||||||||||||||||||||||      |
gtgaaacccatactctcaactaatgtcctctgttttcccagttgtatt-acaatgatgactgtataactgattttcttccgttttgttggtgcagAAAGTGCCTTTCCTTTCTGAAGATCTAGAGTTGGAGTGTGAAGGAAGGGACAAGTACAAGTGCGGTTCCAATGTTTTCTGGAAATGGTGAAGAGGGCAAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125137343|gb|EL177198.1|EL177198
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAG                         AAAGTTCCATTTATCTCAGAAG
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAG
EST: gi|125191321|gb|EL206275.1|EL206275
EST:     CCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125005030|gb|EL077299.1|EL077299
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTT
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAA-Ggtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTT
EST: gi|124943148|gb|EL019351.1|EL019351
EST:     ATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATTCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
genomic: ATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTA-TCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
EST: gi|125287250|gb|EL301335.1|EL301335
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
EST: gi|86059378|gb|DR355135.1|DR355135
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124785984|gb|EH875663.1|EH875663
EST:     GGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059385|gb|DR355142.1|DR355142
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125210132|gb|EL225086.1|EL225086
EST:     TGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGA
genomic: TGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGA
EST: gi|125319367|gb|EL333452.1|EL333452
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG
EST: gi|124987968|gb|EL060385.1|EL060385
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCA-GCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
EST: gi|124867505|gb|EH951942.1|EH951942
EST:     TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059394|gb|DR355151.1|DR355151
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|116434378|gb|EG476970.1|EG476970
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125076462|gb|EL139606.1|EL139606
EST:     AAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTT
genomic: AAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAA-Ggtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTT
EST: gi|125017331|gb|EL089600.1|EL089600
EST:     TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGA
genomic: TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGA
EST: gi|125055634|gb|EL125745.1|EL125745
EST:     CCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGAACTTTGGAATGCGAAGGCAAGG
genomic: CCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG--CTTTGGAATGCGAAGGCAAGG
EST: gi|124887127|gb|EH966029.1|EH966029
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTA
EST: gi|86059384|gb|DR355141.1|DR355141
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124956641|gb|EL031545.1|EL031545
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAG
EST: gi|124774856|gb|EH864985.1|EH864985
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
EST: gi|124855781|gb|EH940218.1|EH940218
EST:     CTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059382|gb|DR355139.1|DR355139
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059373|gb|DR355130.1|DR355130
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059372|gb|DR355129.1|DR355129
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125286793|gb|EL300878.1|EL300878
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAG                         AAAGTTCCATTTATC
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATC
EST: gi|125310711|gb|EL324796.1|EL324796
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTA
EST: gi|125320375|gb|EL334460.1|EL334460
EST:     CCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059369|gb|DR355126.1|DR355126
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124772859|gb|EH862988.1|EH862988
EST:     TCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: TCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125275095|gb|EL289180.1|EL289180
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAG                         AAAGTTCCATTTATCTCA
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCA
EST: gi|125265655|gb|EL279740.1|EL279740
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAG                         AAAGTTCCATTTATCT
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCT
EST: gi|125220495|gb|EL234580.1|EL234580
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCT
EST: gi|125182917|gb|EL198116.1|EL198116
EST:     CCTGAGAATTTCACTGGCTGCCAAGATCTTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CCTGAGAATTTCACTGGCTGCCAAGATC-TTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125005271|gb|EL077540.1|EL077540
EST:     TTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: TTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125230556|gb|EL244641.1|EL244641
EST:     TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124750443|gb|EH840573.1|EH840573
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGA
EST: gi|124735548|gb|EH826950.1|EH826950
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCTGAAGATATTGCTTTGGAATGCGAAGG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
EST: gi|124796802|gb|EH886481.1|EH886481
EST:     AAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: AAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124892544|gb|EH971446.1|EH971446
EST:     CTGGCTGCCAAGATCTTGCCAAGTCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
genomic: CTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
EST: gi|125245170|gb|EL259255.1|EL259255
EST:     TTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: TTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059377|gb|DR355134.1|DR355134
EST:     GCAAGTTCCCTGAGAATCTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|116438424|gb|EG481016.1|EG481016
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124798062|gb|EH887741.1|EH887741
EST:     GCAAGTTCCCTGAGAATTTCACTGGCCGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125026689|gb|EL098958.1|EL098958
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTAT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTAT
EST: gi|47829119|gb|CK118803.1|CK118803
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTC
EST: gi|125185982|gb|EL200936.1|EL200936
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGG
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGG
EST: gi|125093619|gb|EL151158.1|EL151158
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTAT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTAT
EST: gi|86059393|gb|DR355150.1|DR355150
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCACAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125017821|gb|EL090090.1|EL090090
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTT
EST: gi|124904632|gb|EH978712.1|EH978712
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTA
EST: gi|125318229|gb|EL332314.1|EL332314
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAA
EST: gi|86059380|gb|DR355137.1|DR355137
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|164022670|gb|ES136301.1|ES136301
EST:     GCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
genomic: GCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
EST: gi|86059392|gb|DR355149.1|DR355149
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059404|gb|DR355161.1|DR355161
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAANN                         NAAGTTCCATTTATCTCAGAA--TATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125322216|gb|EL336301.1|EL336301
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTT
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTT
EST: gi|125249804|gb|EL263889.1|EL263889
EST:     CCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125122326|gb|EL169006.1|EL169006
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATT
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAA-GATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATT
EST: gi|86059381|gb|DR355138.1|DR355138
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125282034|gb|EL296119.1|EL296119
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGG
EST: gi|124760187|gb|EH850317.1|EH850317
EST:     ATTTCACTGGCTGCCAAGATCTTGTCCTAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
genomic: ATTTCACTGGCTGCCAAGATCTTG-CC-AAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
EST: gi|125283482|gb|EL297567.1|EL297567
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTAT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTAT
EST: gi|124864936|gb|EH949373.1|EH949373
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG
EST: gi|124722352|gb|EH813754.1|EH813754
EST:     CACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125280095|gb|EL294180.1|EL294180
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG
EST: gi|86059397|gb|DR355154.1|DR355154
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059395|gb|DR355152.1|DR355152
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125297067|gb|EL311152.1|EL311152
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
EST: gi|124710668|gb|EH802070.1|EH802070
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGGCTTTGGAATGCGAAGG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG-CTTTGGAATGCGAAGG
EST: gi|125109556|gb|EL161950.1|EL161950
EST:     CTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124859118|gb|EH943555.1|EH943555
EST:     ATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: ATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124857887|gb|EH942324.1|EH942324
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCT
EST: gi|86059396|gb|DR355153.1|DR355153
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125305033|gb|EL319118.1|EL319118
EST:     TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATAATTGCTTTGGAATGCGAAGGCAAGGA
genomic: TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATA-TTGCTTTGGAATGCGAAGGCAAGGA
EST: gi|86059383|gb|DR355140.1|DR355140
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|86059364|gb|DR355121.1|DR355121
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124989595|gb|EL061896.1|EL061896
EST:     CAAGTTCCCTGAGAATTTCACTTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
genomic: CAAGTTCCCTGAGAATTTCAC-TGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
EST: gi|125038884|gb|EL111153.1|EL111153
EST:     GCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124729639|gb|EH821041.1|EH821041
EST:     TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATTATTTGCTTTGGAATGCGAAGGCAAGG
genomic: TTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGAT-ATT-GCTTTGGAATGCGAAGGCAAGG
EST: gi|124759057|gb|EH849187.1|EH849187
EST:     GCGAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATT
EST: gi|124718726|gb|EH810128.1|EH810128
EST:     CCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124956084|gb|EL031042.1|EL031042
EST:     CCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTTGGAATGTCGAAGGCAAGG
genomic: CCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTT-GGAATG-CGAAGGCAAGG
EST: gi|116467443|gb|EG510035.1|EG510035
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124828044|gb|EH912910.1|EH912910
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGAT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGAT
EST: gi|86059390|gb|DR355147.1|DR355147
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124713763|gb|EH805165.1|EH805165
EST:     CACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125319492|gb|EL333577.1|EL333577
EST:     CAAGTTCCCTTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTG
genomic: CAAGTTCCC-TGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG
EST: gi|125104434|gb|EL158511.1|EL158511
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTACCTCAGAAGATAT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATAT
EST: gi|86059399|gb|DR355156.1|DR355156
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125108275|gb|EL161272.1|EL161272
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGA
EST: gi|86059368|gb|DR355125.1|DR355125
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|125229043|gb|EL243128.1|EL243128
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCT
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCT
EST: gi|125236914|gb|EL250999.1|EL250999
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGG
EST: gi|125191372|gb|EL206326.1|EL206326
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGACAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTG
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAG-CAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTG
EST: gi|116440338|gb|EG482930.1|EG482930
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124863833|gb|EH948270.1|EH948270
EST:     CTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: CTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
EST: gi|124881111|gb|EH960013.1|EH960013
EST:     CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAG
genomic: CAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAG
EST: gi|86059391|gb|DR355148.1|DR355148
EST:     GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAG                         AAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC
genomic: GCAAGTTCCCTGAGAATTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGgtttgtctaa ... tgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aataatatttaacttgaagagattgtgatgttcttgttcgttttctgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT
      atttaac  putative branch site (score: 3)
                              ttcttgttcgttttct  putative PPT
     tatttaactt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtttgtctaatatccacaacgttttcttttctttgggaataatatttaacttgaagagattgtgatgttcttgttcgttttctgttttgcagAAAGTTCCATTTATCTCAGAAGATATTGCTTTGGAATGCGAAGGCAAGGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGAAGAACTTTGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAC