1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtcattattcttcacccttcattgccatatctttaccctagtatagtatatatataaaacatttgattataataatgttgaaatatcaaattgagaagttcatggaaattgtgactacagGCATTTGAAGGGAGAAGATATACAGTCTCTCAACTTGAAAAATCTGATGGCTGTCGAGCACGCCATTGAACATGGCCTCGACAAAGTCCGAGACCACCAG
species | Arabidopsis thaliana |
transcript | AT5G20240.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GMGATTGATAGGATCAAGMAAGAGAATGATAGCTTACAACTGGAGCTCAG GCATTTGAAGGGMGWAGATATACAGTCTCTCAACTTGAAAAATCTGATGGCEST: gi|86074442|gb|DR370199.1|DR370199
genomic: GAGATTGATAGGATCAAGAAAGAGAATGATAGCTTACAACTGGAGCTCAGgtcattattc ... gtgactacagGCATTTGAAGGGAGAAGATATACAGTCTCTCAACTTGAAAAATCTGATGGC
EST: GAGATTGATAGGATCAAGAAAGAGAATGATAGCTTACAACTGGAGCTCAG GCATTTGAAGGGAGAAGATATACAGTCTCTCAACTTGAAAAATCTGATGGC
genomic: GAGATTGATAGGATCAAGAAAGAGAATGATAGCTTACAACTGGAGCTCAGgtcattattc ... gtgactacagGCATTTGAAGGGAGAAGATATACAGTCTCTCAACTTGAAAAATCTGATGGC
attataataatgttgaaatatcaaattgagaagttcatggaaattgtgactacagGCATTTGAAGGGAGAAGATATACAGTCTCTCAACTTGAAAAATCTGATGGCTGTCGAGCACGCCATTGAACATGGCCTCGACAAAGTCCGAGACCACCAG
atttgat putative branch site (score: 5)
aataatgttgaaatat TA-rich tract