1 5' 3' | 2 5' 3' | 3 5' 3' |
gtttacaaatcaaaaccacttgttacattcatttttgttgattttataaaatgctaaaatgtgattgctttgtgccgtagGAGAATCCTGATGCTGGGCAGTATCGGTTGAGTGTTCCGCATGATCTCAAGAAGCTAGAGATTCTCTTTGCGGGTTGTAATGTAGAGGTGAAAAATGATG
species | Arabidopsis thaliana |
transcript | AT5G05800.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGAGCAACAGGTTTCGTGCAACTGATGATGACTGGGCTAACTATTTACAG GAGAATCCTGATGCTGGGCAGTATCGGTTGAGTGTTCCGCATGATCTCAAG
genomic: AGAGCAACAGGTTTCGTGCAACTGATGATGACTGGGCTAACTATTTACAGgtttacaaat ... tgtgccgtagGAGAATCCTGATGCTGGGCAGTATCGGTTGAGTGTTCCGCATGATCTCAAG
cattcatttttgttgattttataaaatgctaaaatgtgattgctttgtgccgtagGAGAATCCTGATGCTGGGCAGTATCGGTTGAGTGTTCCGCATGATCTCAAGAAGCTAGAGATTCTCTTTGCGGGTTGTAATGTAGAGGTGAAAAATGATG
tgctaaa putative branch site (score: 2)
ttgcttt putative PPT
atttttgttgatttta TA-rich tract