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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtaacacgttttacagtaataacgtctttctttttactcttcccaaaatgagcattttggataacgtacgtttttgagttatggacagtgtttttttaatcaaagatatttattggctgtttctcttgatgtagGATATGTATGGTGATAATCCTGAGCGAAAGAAGAAAGGATCCTTGTCAGTAGGCGTTCCCGGGGAAGTCGCGGGTCTATACACGGCTTGGACACAACACG

Basic information

species Arabidopsis thaliana
transcript AT4G39650.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatggacagtgtttttttaatcaaagatatttattggctgtttctcttgatgtagGATATGTATGGTGATAATCCTGAGCGAAAGAAGAAAGGATCCTTGTCAGTAGGCGTTCCCGGGGAAGTCGCGGGTCTATACACGGCTTGGACACAACACG
                                     ctgtttctctt  CT-rich tract
       agtgtttttttaatca  TA-rich tract