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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtctcaagtttgtctctgtttttactatcattctttttcttgtgatacaagaaaaatgaatttactctggttttgatgagtttttcttttcccagGTTATGTGACGGTGGTGAATTGCTAGATCGAATACTAGCTAA

Basic information

species Arabidopsis thaliana
transcript AT4G36070.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtgatacaagaaaaatgaatttactctggttttgatgagtttttcttttcccagGTTATGTGACGGTGGTGAATTGCTAGATCGAATACTAGCTAA
                              ttttgat  putative branch site (score: 4)
                                        tttttcttttccc  putative PPT
        aagaaaaatgaattta  TA-rich tract