Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtaacctatgtcctgaataaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT

Basic information

species Arabidopsis thaliana
transcript AT4G34670.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: LOC_Os02g18550.1 (Oryza sativa), 3'ss of exon 1
--------------------------------------gtaagtaacctatgtcctgaataaaatt-ctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatg---gtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
                                          ||   || ||  |||  |    || ||  |  || |    | | ||||  |   |  ||| |   |   |   | |   ||   |||||| || |||||||| ||||||||||||||||| ||| | ||||| ||       ||| |   | | ||  | || ||||| || || |||||||| ||||| 
gtaagctgcttgcgcgcgggcggtgtgggcgccacacctctcgtcctctctgagctgcttgttcttgcttggggtttttgggggattctgatttgggacttcttctctttttctctctccgtgtgggtgcagCGTCGATCCCTTTTCCAAGAAGGATTGGTACGACATCAAGGCGCCGACCGTGTTCTCCGTCCGCAACATCGGCAAGACCCTCGTCTCCAGGACCCAGGGG

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA10G39050.1 (Glycine max), 3'ss of exon 1
gtaagtaacctatgtcctgaataaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattg----------ttatggatg---gtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
|| |||| | |   |      |    || ||    || || ||||  | |   | ||   |||   ||| |||            || ||  ||   |||||| | |||||||||  |||||||||||||||||||| | |||||||||  |  |||       |  |||||||| || || || || ||  | |||||||||
gttagtatcttccatttcttttccccttttctctgttttatttgtgtttttgctttaacattcaaaattcaatgacgtgtttggtttgtgtgtgaatgtgcagAGCTGATCCCTTTGCCAAGAAGGATTGGTATGACATTAAGGCTCCTTCTGTTTTTCAAGTGAAAAATGTTGGCAAAACCCTCGTCTCTCGTACTCAGGGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S46_147V6.1 (Physcomitrella patens), 3'ss of exon 1
----------------------------------------------------------------------------------------gta-agtaacctatgt-cctgaataaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
                                                                                        ||  ||     ||||| ||    |  |||   | |      |  ||   ||||  || ||||   ||| ||      || || ||  || ||||| |||||||||||||||||||||||||||||| | ||||| ||   | |||||||  | | |||  | || |||||||| ||  |||||||   ||| 
gtactctcccacactctctgcgctctgtattcgtgtcttcatgcttgcattgtgtctcccgcgagctctcgttccgtggcctttaggtgtggagctttttatgtgccctggtggaatgtgctgtggctcacatgagttctgattagagtggcggtggtt------ttttgcat--tgtagTGTCGATCCCTTCTCCAAGAAGGATTGGTATGACATCAAGGCACCCAATACTTTCACTCAAAAGAACTTGGGAAAGACTCTCGTGACCAGGACCGCGGGA

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S17_306V6.1 (Physcomitrella patens), 3'ss of exon 1
--------------gtaagtaacctatgtcctg-aataaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatg----gtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
               |   | | || | | |   | |  |||    |  ||  |  |||| |  | |  |  || |  |  |       |   |||  |    ||||||||| || ||||||||||||||||| ||||||||  | |||||||||    | |||||| | | |    |||||||||| |||||  |||| ||   ||||
gtaacgtccgctggctgtctgagctctttacgacagtcgaatgtgtaatttcatttttgtgagttattgagggtttctgctaacttgacgacgtgggagtggtgtgcagTGTCGACCCCTTCTCCAAGAAGGACTGGTATGATATCAAGGCTCCTAACACCTTCACGCAGAAGTCGCTTGGGAAGACCCTTGTCACCAGAACCGCGGGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S80_120V6.1 (Physcomitrella patens), 3'ss of exon 1
------------------------------------gtaagtaacctatgtcctgaataaaatt---ctcagatttctaattgta-atctgtatata-gtgttcgtg-attgaattgttatggatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
                                     ||| |  |     | |||       ||    | || |||| |  | |   | ||| |  | |  ||   |    | |  ||      |  |||||||| ||||| ||||| |||||||||||||||||| | ||||| ||     | |||||| | | |    | |||||||| || ||  |||||||   ||||
gtagcgctctccttctccttctctttacaggaatggctaattcgctgtcctgctgcgctggtttgagtttaggtttcgaggtttgtgtttgtttccacgcattgacgcggaggacggtgggatgtaatgcagTGTCGATCCTTTCTCGAAGAAGGATTGGTATGACATCAAGGCCCCCAACACCTTCACGCAGAAGTCGCTGGGGAAGACCCTGGTGACCAGGACCGCGGGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S92_47V6.2 (Physcomitrella patens), 3'ss of exon 1
------gtaagtaacctatgtcctgaataaaattct--cagatttctaattgtaatctgtatatagtgttcgtg-attgaattgttatggatg----gtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
       ||| |     ||| | |    |   || |    | ||| |    ||  |  | || ||    |     ||||| || || ||   |    ||||||||| ||||| |||||||||||||| ||||||||  | ||||| ||   |   |||||| | | |    | || |||||||||||  | ||||||   || 
gtacgtctaaattcaacatggcgttgtgaggtttttggtgggtttttgtgggttgtgagcatttaaaactgtcatattgattttttttgtgcgtcttgtgcagTGTCGATCCTTTCTCCAAGAAGGACTGGTATGATATCAAGGCACCCAATATCTTCACGCAAAAGGCGTTGGGAAAGACTCTTGTGACAAGGACTGCCGGC

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S219_50V6.1 (Physcomitrella patens), 3'ss of exon 1
-------------------------------------------------------------------gtaagtaacctatgtcctgaataaaattctcagatttc---taattgtaatctgtatatagtgttcgtgattgaattgttatggat------ggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
                                                                    ||  |  | |  ||  ||  |    ||||  | |||    |  ||||    | |||   | | |  | | |  |  |     |||        |||||||| ||||| |||||||||||||| ||||||||| | ||||| ||     | |||||| | | |||| | ||||||||||| ||  | |||||   ||| 
gtacttctttccagtacttttctactgtgaattcacggctccactgcgtctgccaagtgtttgtgtactagctgtcttgagtgatggtttggtttctagggtttagtgtgcttgtgtggtatatgcggaggttctaactagagcgacgatgatttttgcactgcagTGTCGATCCTTTCTCCAAGAAGGACTGGTATGACATCAAGGCACCCAACACCTTCACGCAGAAGAATTTGGGGAAGACTCTCGTCACTAGGACCGCGGGA

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S179_15V6.1 (Physcomitrella patens), 3'ss of exon 1
----------------------gtaagtaacctatgtcctgaa----taaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatgga-tggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
                         | || |    || | | |    ||   || |     ||| || |||    ||   ||   ||     || ||  ||||   |  | |||||| || ||||| |||||||||||||||||||||||| | |||||||||    | |||||| | | |    | |||||||| || ||  |||||||   ||||
gtacaccttccctaccttgccctccattacctccagtgccgcacttgtaggtttgtgttgcttccaaatgttccttgagcatttggtctaacatggagatgtttgagtcttgtgcagCGTCGATCCTTTCTCCAAGAAGGATTGGTATGACATCAAGGCTCCTAACACCTTCACGCAGAAGTCGTTGGGGAAGACCCTCGTCACCAGGACGGCGGGT

upper sequence: AT4G34670.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S174_49V6.1 (Physcomitrella patens), 3'ss of exon 1
----------------------------------------------------gtaagtaacctatgtcctgaat--aaaattctcagatttctaa--ttgtaatctgtatat-agtgttcgtgattgaattg-------ttatggatggt--gcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
                                                         |   ||||  ||   |   | | |  |  | ||  ||   || | || ||| | | ||  || | |||   || |       || ||  |  |  |||||||||||||||||||||||||||| ||||||||| | || |||||     | ||| || | | |    | || |||||||| ||  |||||||    |||
gtacgctcccataatctctctctctctctctctctctccctcgctcgctatctctctttctctatcccccccactcacagtggtgcgtttattagggttttgatgtgtttgtgaggatttgagatgacatggcgatatcttctgagtcctacgcagTGTTGATCCCTTCTCCAAGAAGGACTGGTATGACATCAAAGCTCCCAACACCTTCCCGCAGAAGTCGCTGGGAAAGACTCTCGTGACCAGGACCGCCGGT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|86054275|gb|DR350032.1|DR350032
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054239|gb|DR349996.1|DR349996
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054283|gb|DR350040.1|DR350040
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054294|gb|DR350051.1|DR350051
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054257|gb|DR350014.1|DR350014
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054264|gb|DR350021.1|DR350021
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054274|gb|DR350031.1|DR350031
EST:     GAAGAACGRGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGABCSCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054293|gb|DR350050.1|DR350050
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054267|gb|DR350024.1|DR350024
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054247|gb|DR350004.1|DR350004
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054252|gb|DR350009.1|DR350009
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054250|gb|DR350007.1|DR350007
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATWGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054270|gb|DR350027.1|DR350027
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054281|gb|DR350038.1|DR350038
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054284|gb|DR350041.1|DR350041
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054242|gb|DR349999.1|DR349999
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|124793505|gb|EH883184.1|EH883184
EST:     GGGAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GGGAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054292|gb|DR350049.1|DR350049
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054272|gb|DR350029.1|DR350029
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054276|gb|DR350033.1|DR350033
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054277|gb|DR350034.1|DR350034
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054289|gb|DR350046.1|DR350046
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054249|gb|DR350006.1|DR350006
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054259|gb|DR350016.1|DR350016
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054233|gb|DR349990.1|DR349990
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054296|gb|DR350053.1|DR350053
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|164044406|gb|ES024113.1|ES024113
EST:     AAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: AAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054240|gb|DR349997.1|DR349997
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TTTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054254|gb|DR350011.1|DR350011
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054285|gb|DR350042.1|DR350042
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TTTTSATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054280|gb|DR350037.1|DR350037
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|124737205|gb|EH828607.1|EH828607
EST:     GGGAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GGGAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054241|gb|DR349998.1|DR349998
EST:     GAAGAACRGGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054263|gb|DR350020.1|DR350020
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054256|gb|DR350013.1|DR350013
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054282|gb|DR350039.1|DR350039
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054271|gb|DR350028.1|DR350028
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054258|gb|DR350015.1|DR350015
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054287|gb|DR350044.1|DR350044
EST:     GAAGAACRRGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGRTCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054253|gb|DR350010.1|DR350010
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054295|gb|DR350052.1|DR350052
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054279|gb|DR350036.1|DR350036
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054236|gb|DR349993.1|DR349993
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TTTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054297|gb|DR350054.1|DR350054
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054288|gb|DR350045.1|DR350045
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054251|gb|DR350008.1|DR350008
EST:     GAAGAASGGGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054248|gb|DR350005.1|DR350005
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054266|gb|DR350023.1|DR350023
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|125199691|gb|EL214645.1|EL214645
EST:     GAAGAACAAGAGGA-TTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTT
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTT
EST: gi|86054278|gb|DR350035.1|DR350035
EST:     GAAGRGSSAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054290|gb|DR350047.1|DR350047
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054243|gb|DR350000.1|DR350000
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054238|gb|DR349995.1|DR349995
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054269|gb|DR350026.1|DR350026
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054246|gb|DR350003.1|DR350003
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054273|gb|DR350030.1|DR350030
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054265|gb|DR350022.1|DR350022
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054268|gb|DR350025.1|DR350025
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054235|gb|DR349992.1|DR349992
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054261|gb|DR350018.1|DR350018
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGSTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054244|gb|DR350001.1|DR350001
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATATGGTATGACGTGAAGGCTCCTGGTT
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGAT-TGGTATGACGTGAAGGCTCCTGGTT
EST: gi|86054260|gb|DR350017.1|DR350017
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|124809176|gb|EH894916.1|EH894916
EST:     AACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGACTCCTGGTT
genomic: AACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGG-CTCCTGGTT
EST: gi|86054237|gb|DR349994.1|DR349994
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|164105414|gb|ES180028.1|ES180028
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054262|gb|DR350019.1|DR350019
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054234|gb|DR349991.1|DR349991
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
EST: gi|86054286|gb|DR350043.1|DR350043
EST:     GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGC                         TTTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC
genomic: GAAGAACAAGAGGATTTCAAAGGGTAGGAAAGGAGGAAAGAAGAAGGCgtaagtaacc ... gatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT
 ttctaat  putative branch site (score: 2)
                                   aattgttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaagtaacctatgtcctgaataaaattctcagatttctaattgtaatctgtatatagtgttcgtgattgaattgttatggatggtgcagTGTTGATCCCTTCTCCAAGAAGGATTGGTATGACGTGAAGGCTCCTGGTTCTTTCACGAACAGGAATGTTGGGAAGACTCTTGTTTCCAGGACTCAGGGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAAGA