1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgagatgggattatctacttctgttctgctttaagtcatttacaggtgatttgactccttctataactctgttgtgtgtcagGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAGGGAATCTTTGCGAGTGCCTCCTGGCCAACCAGAGAACTTGAGAAAGACCT
species | Arabidopsis thaliana |
transcript | AT4G12780.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CGACAGAGAACCAACCCTCTG GATCCTTTCCTAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAG
genomic: CGACAGAGAACCAACCCTCTGgtgagatggg ... tgtgtgtcagGATCCTTTCC-AGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAG
gctttaagtcatttacaggtgatttgactccttctataactctgttgtgtgtcagGATCCTTTCCAGGATTCATGGAACAAAGGAGGATCTTTCGAATCTAGCAGGGAATCTTTGCGAGTGCCTCCTGGCCAACCAGAGAACTTGAGAAAGACCT
ctataac putative branch site (score: 3)
ctctgtt CT-rich tract
ttctataa TA-rich tract