1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtgagactctatccgatagttttttttttagtttggatttctagaaactgtgtaaatgtgtttgatcatgttggagtgacatgtcttgatttgtacactctttatttgagtagTGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTCGTCGCATGGTTTCAGGCGGAATGACTATAGTTCATCGCCTCCCACCAGG
species | Arabidopsis thaliana |
transcript | AT4G01290.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGCAAGAAGCTGCCAAATCTGCCTGGTGAATTTGATGAAGCACTGTTGCT TGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTCEST: gi|116457015|gb|EG499607.1|EG499607
genomic: TGCAAGAAGCTGCCAAATCTGCCTGGTGAATTTGATGAAGCACTGTTGCTgtgagactct ... atttgagtagTGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTC
EST: TGCAAGAAGCTGCCAAATCTGCCTGGTGAATTTGATGAAGCACTGTTGCT TGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTC
genomic: TGCAAGAAGCTGCCAAATCTGCCTGGTGAATTTGATGAAGCACTGTTGCTgtgagactct ... atttgagtagTGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTC
tgtttgatcatgttggagtgacatgtcttgatttgtacactctttatttgagtagTGACTTCGAAGATCCTTCACCCGAGCGAGCAAGAATTTCAGGCGATTTTTCGTCGCATGGTTTCAGGCGGAATGACTATAGTTCATCGCCTCCCACCAGG
tcttgat putative branch site (score: 4)
ctctttattt putative PPT
tctttattt TA-rich tract