1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagtttctgttgtgacaagtctttgttgcttcatctattccaaagagtaggatgcggttatagcagcagtctaactttggttttcttgcttctggtagGCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGTGAAATTAATAGTTCACTG
species | Arabidopsis thaliana |
transcript | AT3G51090.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: GCTTAGGAGTTGTTTCACAGTTAGTTGTCTCCAAGGGAGAGATGCAGAAA GCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGTGAAATTAATEST: gi|116476184|gb|EG518776.1|EG518776
genomic: GCTTAGGAGTTGTTTCACAGTTAGTTGTCTCCAAGGGAGAGATGCAGAAAgtaagtttct ... cttctggtagGCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGTGAAATTAAT
EST: GCTTAGGAGTTGTTTCACAGTTAGTTGTCTCCAAGGGAGAGATGCAGAAA GCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGTGAAATTAAT
genomic: GCTTAGGAGTTGTTTCACAGTTAGTTGTCTCCAAGGGAGAGATGCAGAAAgtaagtttct ... cttctggtagGCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGTGAAATTAAT
agagtaggatgcggttatagcagcagtctaactttggttttcttgcttctggtagGCTGAAATGACGCAGGAATCAAACTTATCCAAGTTCAAAAGTGAAATTAATAGTTCACTG
gtctaac putative branch site (score: 2)
ttttcttgcttct putative PPT
taacttt TA-rich tract