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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagtctctctcactagtcactaataatacttagatcaaatttaaatgattaacaatatttattacaaataaattgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG

Basic information

species Arabidopsis thaliana
transcript AT2G06850.1
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT2G06850.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA19G28220.1 (Glycine max), 3'ss of exon 2
-----------------------------------------------------gtaagtctctctcactagtcactaataatacttagatcaaatttaaatgattaacaata--------tttattacaaataaattgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG
                                                      ||  | | |   ||  ||   |   | |  |||| |    | ||     | ||    |        ||| |||    | ||   | || || |||| ||    ||    ||||| ||||||||||||||||||||| | || |||||||||||||||||    || || || |||||||| ||||||||||
gtatgcacaaaatcaaatgaaaaataaaaagtttctgtctttatttgcttcagctattttttttatacctgtatttgggattctttagtttgtgtgtagtatgtgaatgtgacctttggttttgttatggttgaaac-tatgcagTTATCTTCCCAAAATGCGGAGCACGACGAGATAGACTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATTTTGCAAACAAATGTTTTCACAGGAG

upper sequence: AT2G06850.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA16G04950.2 (Glycine max), 3'ss of exon 2
----------------------gtaagtctctctcactagtcactaataatacttagatcaaatttaaatgattaacaatattt-attacaaataaattgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG
                        |||| ||| |   || |  ||   | |  ||   |   || | || | | | |  | |||  |||    |  |   |||| || |||| ||    |||   |||||||| |||||||||||||||||| | || |||||||||||||||||    ||  | || |||||||| ||||| ||||
gtatgcacaaaatgaaaaaaaaaaaagtttctatttttatttgctt-cagtcattgtgtagtatgtgaacg-tgacctttgttttgttatggttggaac-tgtgcagTTATCTTCCCAAAACGCGGAGCATGATGAGATAGACTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATTCTGCAAACAAATGTGTTCACCGGAG

upper sequence: AT2G06850.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA19G28200.1 (Glycine max), 3'ss of exon 2
----------------gtaagtctctctcactagtcactaataatacttagatcaa-atttaaatgattaacaatatttattacaaataaattgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG
                 ||| |       |   ||    | || |  | | ||     |||  |   |     ||||||  ||  | |  | |   || || |||| |||   ||    |||||||| |||||||| ||||||||| | || |||||||||||||||||    ||||| || |||||||| ||||| ||||
tactattaataatattctaattaaactatatatgtgtggattagttttcaaatttttgtttcgaccttgttgtatatttgctatgattggaatcc-tgcagTTATCTTCTCAAAATGCGGAGCATGATGAGATAGATTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATATTGCAAACAAATGTTTTCACCGGAG

upper sequence: AT2G06850.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: GLYMA16G04960.1 (Glycine max), 3'ss of exon 2
gtaagtctctctcactagtca----ctaataa---tacttagatcaaatttaaa-----tgatt-aacaatatttattacaaataaattgtgt---gaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG
  || | | |   | || | |    ||||| |   ||  || |  |  ||| ||     || || |||  | ||||||    || | | |  |     || |||| |||   ||    ||||| || |||||||| ||||||||| | || |||||||||||||||||    || || || |||||||| ||||| ||||
aaaactttatactattaataatattctaattaaattatatatactagttttcaaatttttgcttcaaccttgtttatttgctatgattggaatcctatagTTATCTTCTCAAAATGCGGAGCACGATGAGATAGATTTTGAGTTCTTGGGGAACAGAACAGGACAACCTTACATTTTGCAAACAAATGTGTTCACCGGAG

upper sequence: AT2G06850.1 (Arabidopsis thaliana), 3'ss of exon 2
lower sequence: PP1S309_38V6.2 (Physcomitrella patens), 3'ss of exon 3
--------------------------------------------------------------------------------------------gtaagtctctctcactagtcactaataatacttagatcaaattta------aatgattaacaatattta--ttacaaataaattgtgtga----agCTATCATCTACCAACAATGAG----CATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG
                                                                                             | | |  |  |  |  |   |   ||   |  |   ||  | ||      |||  |   |||  || |  |||||||||  || |||||    || | || || ||  |||    |    ||||||||||| ||||||||||||||||||||     | || || ||    ||  | || || ||||| |   |     
gtaaccccgataccactgacttgactattagtgttctatttcagagatgaagttacgtgcacagaagaattgttgctgttcaattgtctgttctgatttgcagtagcatgctgcgggtagatcacaccgcacttctagagagcaatattctgcaactttcagtttacaaataccttctgtgattgtagATGTCGTC-ACAGACACCAGGATTACATGACGAGATGGACTTTGAGTTCCTTGGAAATGTGTCGGGGCAGCCCTACATCCTGCAAACCAATGTCTATGCGA---

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125111616|gb|EL163021.1|EL163021
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGA
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGA
EST: gi|124986780|gb|EL059276.1|EL059276
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTG
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTG
EST: gi|124876890|gb|EH956327.1|EH956327
EST:     AAGCTTCCAGCTGGTGACACAGCCGGGGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
genomic: AAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
EST: gi|124844540|gb|EH928977.1|EH928977
EST:     AAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTC-AT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
genomic: AAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
EST: gi|301502134|gb|HO207674.1|HO207674
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124757609|gb|EH847739.1|EH847739
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGT
EST: gi|124709819|gb|EH801221.1|EH801221
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTACCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124854260|gb|EH938697.1|EH938697
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
EST: gi|124761838|gb|EH851968.1|EH851968
EST:     AAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
genomic: AAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTT
EST: gi|124884876|gb|EH963778.1|EH963778
EST:     ACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124790158|gb|EH879837.1|EH879837
EST:     CCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125283147|gb|EL297232.1|EL297232
EST:     CCGGAGTTGTCACAGCTTTCCAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125268960|gb|EL283045.1|EL283045
EST:     CACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGA
genomic: CACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGA
EST: gi|125303963|gb|EL318048.1|EL318048
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125264311|gb|EL278396.1|EL278396
EST:     AGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: AGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125113328|gb|EL164183.1|EL164183
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCGCAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
EST: gi|124992036|gb|EL064305.1|EL064305
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124962456|gb|EL036879.1|EL036879
EST:     GACACAGCCGGAGTTGTCACAGCTTTCTNT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: GACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125266896|gb|EL280981.1|EL280981
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCT
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCT
EST: gi|125050103|gb|EL122372.1|EL122372
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGGGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCA
EST: gi|125286099|gb|EL300184.1|EL300184
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTC
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTC
EST: gi|124764180|gb|EH854310.1|EH854310
EST:     TCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGACATGACGAGATAGACTTTGAGTTCCTT
genomic: TCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAG-CATGACGAGATAGACTTTGAGTTCCTT
EST: gi|124817105|gb|EH901971.1|EH901971
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124888419|gb|EH967321.1|EH967321
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124957844|gb|EL032635.1|EL032635
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|125211341|gb|EL226295.1|EL226295
EST:     GCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: GCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125247055|gb|EL261140.1|EL261140
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCTGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124730927|gb|EH822329.1|EH822329
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCA
EST: gi|125057481|gb|EL126660.1|EL126660
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124926734|gb|EL004532.1|EL004532
EST:     CTGGTGACACAGCCGGAGTTGTCACTAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCAC-AGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125039600|gb|EL111869.1|EL111869
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAAC
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAAC
EST: gi|125265441|gb|EL279526.1|EL279526
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125311525|gb|EL325610.1|EL325610
EST:     TGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: TGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124992223|gb|EL064492.1|EL064492
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
EST: gi|124772248|gb|EH862377.1|EH862377
EST:     CGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124958775|gb|EL033495.1|EL033495
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCA
EST: gi|124909487|gb|EH983567.1|EH983567
EST:     CATTAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: CA-TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|124861310|gb|EH945747.1|EH945747
EST:     TTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGA
genomic: TTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGA
EST: gi|125212807|gb|EL227761.1|EL227761
EST:     CAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125018673|gb|EL090942.1|EL090942
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAG
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAG
EST: gi|125214901|gb|EL229163.1|EL229163
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125316395|gb|EL330480.1|EL330480
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATA
EST: gi|124952944|gb|EL028175.1|EL028175
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125014955|gb|EL087224.1|EL087224
EST:     CTGGTGGCACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125241668|gb|EL255753.1|EL255753
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGA
EST: gi|124758956|gb|EH849086.1|EH849086
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125180213|gb|EL197365.1|EL197365
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAA
EST: gi|125273274|gb|EL287359.1|EL287359
EST:     ACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125254587|gb|EL268672.1|EL268672
EST:     ACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: ACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124914804|gb|EH988678.1|EH988678
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGAT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGAT
EST: gi|124730682|gb|EH822084.1|EH822084
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124928003|gb|EL005686.1|EL005686
EST:     CCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125211002|gb|EL225956.1|EL225956
EST:     TCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: TCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125215773|gb|EL229857.1|EL229857
EST:     TGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: TGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|124759817|gb|EH849947.1|EH849947
EST:     ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGA
genomic: ACATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGA
EST: gi|125283880|gb|EL297965.1|EL297965
EST:     CATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
genomic: CATAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTG
EST: gi|124788784|gb|EH878463.1|EH878463
EST:     CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
genomic: CTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGA
EST: gi|125190819|gb|EL205773.1|EL205773
EST:     TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTAT                         CTATCATCTACCAACAATGAGCATGACGAGATAGACT
genomic: TAAAGCTTCCAGCTGGTGACACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACT
EST: gi|124863714|gb|EH948151.1|EH948151
EST:     ACAGCCGGAGTTGTCACAGCTTTCTAT                         CTTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG
genomic: ACAGCCGGAGTTGTCACAGCTTTCTATgtaagtctct ... ttgtgtgaagC-TATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

acttagatcaaatttaaatgattaacaatatttattacaaataaattgtgtgaagCTATCATCTACCAACAATGAGCATGACGAGATAGACTTTGAGTTCCTTGGAAACAGAACAGGACAACCAGCTATATTACAGACAAATGTATTCACAGGAG
                   gattaac  putative branch site (score: 2)
         aaatttaaatgattaa  TA-rich tract