1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
...ctgtgtttacctaactgtagcacaaatcattttcttctctagtttgtcttgagtttcttgtacctttcacaacaaaaatccttttgttctttctttttagATGCAGCTTCAAGTATGTGGCCACCTGCAGTTGATACCAAAAGCCTCTTTGATCCCGTTATGTCCTTCATGGGTAACACCTCTGATGAGAAACCTGATAC
species | Arabidopsis thaliana |
transcript | AT1G79830.3 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TTTCGACAACGCCCTTGGCTTCGACGACAAGTCCGATTCTGCCGCTGAAG ATGCAGCTTCAAGTATGTGGCCEST: gi|124839978|gb|EH924417.1|EH924417
genomic: TTTCGACAACGCCCTTGGCTTCGACGACAAGTCCGATTCTGCCGCTGAAGgtgttctctt ... ttctttttagATGCAGCTTCAAGTATGTGGCC
EST: TCCGATTCTGCCGCTGAAG ATGCAGCTTCAAGTATGTGGCCACCTGCAGTTGATACCAAAAGCCTCTTTGEST: gi|116425248|gb|EG467840.1|EG467840
genomic: TCCGATTCTGCCGCTGAAGgtgttctctt ... ttctttttagATGCAGCTTCAAGTATGTGGCCACCTGCAGTTGATACCAAAAGCCTCTTTG
EST: TTTCGACAACGCCCTTGGCTTCGACGACAAGTCCGATTCTGCCGCTGAAG ATGCAGCTTCAAGTATGTGGCEST: gi|125082505|gb|EL143382.1|EL143382
genomic: TTTCGACAACGCCCTTGGCTTCGACGACAAGTCCGATTCTGCCGCTGAAGgtgttctctt ... ttctttttagATGCAGCTTCAAGTATGTGGC
EST: CTGCCGCTGAAG ATGCAGCTTCAAGTATGTGGCCACCTGCAGTTGATACCAAAAGCCTCTTTGEST: gi|116430741|gb|EG473333.1|EG473333
genomic: CTGCCGCTGAAGgtgttctctt ... ttctttttagATGCAGCTTCAAGTATGTGGCCACCTGCAGTTGATACCAAAAGCCTCTTTG
EST: TTTCGACAACGCCCTTGGCTTCGACGACAAGTCCGATTCTGCCGCTGAAG ATGCAGCTTCAAGTATGTGGCC
genomic: TTTCGACAACGCCCTTGGCTTCGACGACAAGTCCGATTCTGCCGCTGAAGgtgttctctt ... ttctttttagATGCAGCTTCAAGTATGTGGCC
gtcttgagtttcttgtacctttcacaacaaaaatccttttgttctttctttttagATGCAGCTTCAAGTATGTGGCCACCTGCAGTTGATACCAAAAGCCTCTTTGATCCCGTTATGTCCTTCATGGGTAACACCTCTGATGAGAAACCTGATAC
tccttttgttctttct CT-rich tract
tttcttttta TA-rich tract