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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaggaggaggccttccatttctgtttcagatgtgcgatatttttttattcacttttgttgagttcctggttaaatagtttccttgttaatacgcagGTAGTGAGCTTGGATGTGTTATTATCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCATCATACTTTCCATCAC

Basic information

species Arabidopsis thaliana
transcript AT1G64960.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttttattcacttttgttgagttcctggttaaatagtttccttgttaatacgcagGTAGTGAGCTTGGATGTGTTATTATCTGTGCTTGCCTCTGATCAGACTCATGTTGCTAAGGGAATCGCTCGACTGCTAATACCATCATACTTTCCATCAC
                                          tgttaat  putative branch site (score: 3)
                                    tttccttgtt  CT-rich tract
                            ttaaatagttt  TA-rich tract