1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gtaagtttagtttgattttacattagtaatatttaatagatgaataatttgaaccggtttgattaatatttcgatttttttttgtttatcacagTTGGTGAAATTACAAGATGAGTTGAAGAAAATGACAATGGATAATCAAAAGCTTAGAGAATTGCTTACACAAGTTAGCAACAGTTACACTTCACTTCAGA
species | Arabidopsis thaliana |
transcript | AT1G62300.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CGAAATGGAAGATAAGCGTGCGAAAAATGAG TTGGTGAAATTACAAGATGAGTTGAAGAAAATGACAATGGATAATCAAAAG
genomic: CGAAATGGAAGATAAGCGTGCGAAAAATGAGgtaagtttag ... tttatcacagTTGGTGAAATTACAAGATGAGTTGAAGAAAATGACAATGGATAATCAAAAG
atgaataatttgaaccggtttgattaatatttcgatttttttttgtttatcacagTTGGTGAAATTACAAGATGAGTTGAAGAAAATGACAATGGATAATCAAAAGCTTAGAGAATTGCTTACACAAGTTAGCAACAGTTACACTTCACTTCAGA
gattaat putative branch site (score: 3)
tttttttttgtttatc putative PPT
tttgattaatatttcg TA-rich tract