1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtgagttgtacaagtcatcttttgttctgctgttaaatgagtgcttatgcaattatgtgattatatgttttgattgattgttcacttattcagAAATAATACATTTTATACTGGAGAGGAAGGCGTTGAAGGCTTTTGAACTAACTGAACAACTAGCACAAGACTTGCTTGAGAAAAACAAGGATTTGCAATT
species | Arabidopsis thaliana |
transcript | AT1G06060.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TGGAGTTAAGCAGCCTGCAATTGATCGTGATAACATGGAGAGAAGAAAAC AAATAATACATTTTATACTGGAGAGGAAGGCGTTGAAGGCTTTTGAACTAAEST: gi|19874597|gb|AU235428.1|AU235428
genomic: TGGAGTTAAGCAGCCTGCAATTGATCGTGATAACATGGAGAGAAGAAAACgtgagttgta ... acttattcagAAATAATACATTTTATACTGGAGAGGAAGGCGTTGAAGGCTTTTGAACTAA
EST: TGGAGTTAAGCAGCCTGCAATTGATCGTGATAACATGGAGAGAAGAAAAC AAATAATACATTTTATACTGGAGAGGAAGGCGTTGAAGGCTTTTGAACTAA
genomic: TGGAGTTAAGCAGCCTGCAATTGATCGTGATAACATGGAGAGAAGAAAACgtgagttgta ... acttattcagAAATAATACATTTTATACTGGAGAGGAAGGCGTTGAAGGCTTTTGAACTAA
gagtgcttatgcaattatgtgattatatgttttgattgattgttcacttattcagAAATAATACATTTTATACTGGAGAGGAAGGCGTTGAAGGCTTTTGAACTAACTGAACAACTAGCACAAGACTTGCTTGAGAAAAACAAGGATTTGCAATT
gattgat putative branch site (score: 4)
ttcactt putative PPT
aattatgtgattatat TA-rich tract