1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' |
gtatatagaaagggacagttttcatcattactacttttgctttgaatatgattcagttgtgactaaacgtgcttcctgctgctctttgcagATATGCTTTCCCAATCAAGTGCACCAATGTTGTCTTTGCTGATGACAATGAAACCGTTCGTGAGATTCATGCGGAATATGACCCCGAGAAAAAGTCAAAG
species | Arabidopsis thaliana |
transcript | AT1G25350.2 |
intron # | 18 |
splice site | 3' |
intron type | U2 |
EST: GATTCAAAAGATTATTATGGGCTCGCCCCTGGTAAATCTGTTTTGCTAAG ATATGCTTTCCCAATCAAGTGEST: gi|164093397|gb|ES070540.1|ES070540
genomic: GATTCAAAAGATTATTATGGGCTCGCCCCTGGTAAATCTGTTTTGCTAAGgtatatagaa ... ctctttgcagATATGCTTTCCCAATCAAGTG
EST: GGCTCACCCCTGGTAAATCTGTTTTGCTAAG ATATGCTTTCCCAATCAAGTGCACCAATGTTGTCTTTGC
genomic: GGCTCGCCCCTGGTAAATCTGTTTTGCTAAGgtatatagaa ... ctctttgcagATATGCTTTCCCAATCAAGTGCACCAATGTTGTCTTTGC
ttgctttgaatatgattcagttgtgactaaacgtgcttcctgctgctctttgcagATATGCTTTCCCAATCAAGTGCACCAATGTTGTCTTTGCTGATGACAATGAAACCGTTCGTGAGATTCATGCGGAATATGACCCCGAGAAAAAGTCAAAG
gactaaa putative branch site (score: 2)
cttcctgctgctcttt putative PPT
aatatgatt TA-rich tract