1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
gtaattacatctatcttctttttttgcttttttcccctttattcatctttcccaattgataaagcagtaaatagatttcaattttttctttaaccttctctttcttttgtgtaacttccagTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCTGGCAAGCGGTAGTGGTGCCATCACGCAGAATCTAAGAGTCACTAACAGCCAGCAGG
species | Arabidopsis thaliana |
transcript | AT1G23900.1 |
intron # | 17 |
splice site | 3' |
intron type | U2 |
EST: TATCTCCCAATACTTTCACAGATTTTATATTCCAGGCTGCTGTTCCAAAG TTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCTGGCAAGCEST: gi|116419286|gb|EG461878.1|EG461878
genomic: TATCTCCCAATACTTTCACAGATTTTATATTCCAGGCTGCTGTTCCAAAGgtaattacat ... taacttccagTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCTGGCAAGC
EST: TATCTCCCAATACTTTCACAGATTTTATATTCCAGGCTGCTGTTCCAAAG TTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCTGGCAAGC
genomic: TATCTCCCAATACTTTCACAGATTTTATATTCCAGGCTGCTGTTCCAAAGgtaattacat ... taacttccagTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCTGGCAAGC
gtaaatagatttcaattttttctttaaccttctctttcttttgtgtaacttccagTTCCTCCAGCTGCACTTGGATCCAGCTAGCAGTAACACACTCCTGGCAAGCGGTAGTGGTGCCATCACGCAGAATCTAAGAGTCACTAACAGCCAGCAGG
gtgtaac putative branch site (score: 3)
ttttttctttaacctt CT-rich tract
tagatttcaatttttt TA-rich tract