1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
gtactttccactctaaacatctcaaataataatgatattattttgcatttggaagtccctcactctacatttcataacatgctatatatgatcatacaaaaaaatgttccatagGTTGTAGCTGCGGTTGGTTTCAAGTGTAAACGGCTGGAGATCCCGCGTAATCTGAATCCTCAGGTTGCAGCCATAATCGAGGGTTGTTGGACCAA
species | Arabidopsis thaliana |
transcript | AT5G03730.1 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: GAGCTTGCTACATTGCAACAACCATGGGGTAACTTAAATCCGGCTCAG GTTGTAGCTGCGGTTGGTTTCAAGTGTAAACGGCTGGAGATCCCGCGTAATEST: gi|116423837|gb|EG466429.1|EG466429
genomic: GAGCTTGCTACATTGCAACAACCATGGGGTAACTTAAATCCGGCTCAGgtactttcca ... tgttccatagGTTGTAGCTGCGGTTGGTTTCAAGTGTAAACGGCTGGAGATCCCGCGTAAT
EST: GGGAGCTTGCTACATTGCAACAACCATGGGGTAACTTAAATCCGGCTCAG GTTGTAGCTGCGGTTGGTTTCAAGTGTAAACGGCTGGAGATCCCGCGTAAT
genomic: GGGAGCTTGCTACATTGCAACAACCATGGGGTAACTTAAATCCGGCTCAGgtactttcca ... tgttccatagGTTGTAGCTGCGGTTGGTTTCAAGTGTAAACGGCTGGAGATCCCGCGTAAT
tcactctacatttcataacatgctatatatgatcatacaaaaaaatgttccatagGTTGTAGCTGCGGTTGGTTTCAAGTGTAAACGGCTGGAGATCCCGCGTAATCTGAATCCTCAGGTTGCAGCCATAATCGAGGGTTGTTGGACCAA
tcataac putative branch site (score: 2)
tatatatgatcataca TA-rich tract