1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtcagagaccctctaaatttagaatctgtttgagaaatttggctcataaatttagtccatccattgacacgaagcttcaatgttttcgatgcagGCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGGGCAGGAGTTACTAAGTGTTCATCATGTTTTGATTCAATTCATGAAAATT
species | Arabidopsis thaliana |
transcript | AT3G62120.2 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: AGCAGCTAAAACCCTTTGTTCTCCATTTGATCAGCCTGAACTCCCTGAAG GCACTTTTTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGGEST: gi|86059719|gb|DR355476.1|DR355476
genomic: AGCAGCTAAAACCCTTTGTTCTCCATTTGATCAGCCTGAACTCCCTGAAGgtcagagacc ... ttcgatgcagGCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGG
EST: AGCAGCTAAAACCCTTTGTTCTCCATTTGATCAGCCTGAACTCCCTGAAG GCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGGEST: gi|164048127|gb|ES103487.1|ES103487
genomic: AGCAGCTAAAACCCTTTGTTCTCCATTTGATCAGCCTGAACTCCCTGAAGgtcagagacc ... ttcgatgcagGCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGG
EST: CATTTGATCAGCCTGAACTCCCTGAAG GCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGG
genomic: CATTTGATCAGCCTGAACTCCCTGAAGgtcagagacc ... ttcgatgcagGCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGG
tggctcataaatttagtccatccattgacacgaagcttcaatgttttcgatgcagGCACTCTCTGCTTTGCTTCAGGAAAACCTGCAAAGAAATGGACCTATTGGGGCAGGAGTTACTAAGTGTTCATCATGTTTTGATTCAATTCATGAAAATT
cattgac putative branch site (score: 3)
tgttttc putative PPT
ataaatttagt TA-rich tract