1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtatgttctctcgtcttgcactctaagacaacatgcttttttgttgcttcctttatcagcttaaaattgataaactgttcactgtagGCCTCTGCTTTGTTGGCCTTACCCATCTTCATAGTGTACAAATTCCTCTGTTCGCTCTTCTG
species | Arabidopsis thaliana |
transcript | AT2G24420.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: GCCATGAGCTGTTGGAACCTTTTGCCACCAAAGAGTTCATTTGGTTTGCA GCCTCTGCTTTGTTGGEST: gi|125183283|gb|EL198257.1|EL198257
genomic: GCCATGAGCTGTTGGAACCTTTTGCCACCAAAGAGTTCATTTGGTTTGCAgtatgttctc ... ttcactgtagGCCTCTGCTTTGTTGG
EST: CACCAAAGAGTTCATTTGGTTTGCA GCCTCTGCTTTGTTGGCCTTACCCATCTTCATAGTGTACAAATTCCTCTGT
genomic: CACCAAAGAGTTCATTTGGTTTGCAgtatgttctc ... ttcactgtagGCCTCTGCTTTGTTGGCCTTACCCATCTTCATAGTGTACAAATTCCTCTGT
atgcttttttgttgcttcctttatcagcttaaaattgataaactgttcactgtagGCCTCTGCTTTGTTGGCCTTACCCATCTTCATAGTGTACAAATTCCTCTGTTCGCTCTTCTG
aattgat putative branch site (score: 4)
ttaaaattgataaact TA-rich tract