1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gttgagtgtctcacttttttctcatgattcatatctctttgaccatcgagcttctcaaacattgattgatctttttgttttgttgggactgtaacattttcagGTGACAGTTCGGCTCAGAGAGGACCCTGAAGGCCGTAAAGACTTGCCAGAGATGAGCATCGAAAGTTTGCTTGATGAATTCAAGTTCAAGACAGTCAACT
species | Arabidopsis thaliana |
transcript | AT1G17960.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: CATACAACTACATACTGGTCTTAGGTCAAAAAGAGGTTGCAACTGGACAG GTGACAGTTCGGCTCAGAGAGGACCCTGAAGGCCGTAAAGACTTGCCAGAG
genomic: CATACAACTACATACTGGTCGTAGGTCAAAAAGAGGTTGCAACTGGACAGgttgagtgtc ... acattttcagGTGACAGTTCGGCTCAGAGAGGACCCTGAAGGCCGTAAAGACTTGCCAGAG
agcttctcaaacattgattgatctttttgttttgttgggactgtaacattttcagGTGACAGTTCGGCTCAGAGAGGACCCTGAAGGCCGTAAAGACTTGCCAGAGATGAGCATCGAAAGTTTGCTTGATGAATTCAAGTTCAAGACAGTCAACT
ctgtaac putative branch site (score: 3)
cattttc CT-rich tract
tttttgtttt TA-rich tract