1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtttgttcttataaacacattgagctaaaacatttcattaagaaatagttttgacttaaagtgcaagtaatgtcagGTACTACGAGATGGACCAAACCACGGTTATGGTATATTAGTCTCTGCTGTGCCTAAAGACAGCAATGCCTTTTACTCGCTTCGTGACCCGTCTGAG
species | Arabidopsis thaliana |
transcript | AT5G51460.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: TTCTTCCAATCTATGTTGGGGATGATCGAACAGACGAAGATGCATTTAAG GTATTACGAGATGGACCAAACCACGGTTATGGTAEST: gi|47828165|gb|CK117849.1|CK117849
genomic: TTCTTCCAATCTATGTTGGGGATGATCGAACAGACGAAGATGCATTTAAGgtttgttctt ... gtaatgtcagGTACTACGAGATGGACCAAACCACGGTTATGGTA
EST: TTCTTCCAATCTATGTTGGGGATGATCGAACAGACGAAGATGCATTTAAG GTATTACGAGATGGACCAAACCACGGTTATGGTATATTAGTCTCTGCTGTG
genomic: TTCTTCCAATCTATGTTGGGGATGATCGAACAGACGAAGATGCATTTAAGgtttgttctt ... gtaatgtcagGTACTACGAGATGGACCAAACCACGGTTATGGTATATTAGTCTCTGCTGTG
gagctaaaacatttcattaagaaatagttttgacttaaagtgcaagtaatgtcagGTACTACGAGATGGACCAAACCACGGTTATGGTATATTAGTCTCTGCTGTGCCTAAAGACAGCAATGCCTTTTACTCGCTTCGTGACCCGTCTGAG
ttttgac putative branch site (score: 3)
aaaacatttcattaag TA-rich tract