1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtacgttgtcctctgtttgaagaatactgataccgtagacaagattatcttgttgcatcatagtttatgttttaaagctcatttttctttcggtgtctttgtcttgtctaatgcagGTGAAGAAGCAACAGTCTCTGTCCCACAGTCCAAAGACAAAAACATCAGGCTTCACAGTCGCAACCGGGCAAGGATCTCCATCAGATTCGCCTGGAACTA
species | Arabidopsis thaliana |
transcript | AT3G03790.3 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGATATCCAGATGCAGGAG GTGAAGAAGCAACAGTCTCTGTCCCACAGTCCAAAGACAAAAACATCAGGC
genomic: AGATATCCAGATGCAGGAGgtacgttgtc ... tctaatgcagGTGAAGAAGCAACAGTCTCTGTCCCACAGTCCAAAGACAAAAACATCAGGC
agtttatgttttaaagctcatttttctttcggtgtctttgtcttgtctaatgcagGTGAAGAAGCAACAGTCTCTGTCCCACAGTCCAAAGACAAAAACATCAGGCTTCACAGTCGCAACCGGGCAAGGATCTCCATCAGATTCGCCTGGAACTA
gtctaat putative branch site (score: 3)
tctttgtcttgtct CT-rich tract
atgttttaaa TA-rich tract