1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaagcccttatccatcccttgatttttcggctgcaaccataaatcttgcctgataaacgtagagaggctcctgatcatactatcactcatcgataataccttgtttttttcctttttacagATCTTCTACTTCATTGGGTTTGGGTTATTCTGTCTTGAATCAGTGGTTAGCATCTGGGTTATACAG
species | Arabidopsis thaliana |
transcript | AT1G11180.2 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGATGTGTTGAGCGCTCAGGCATTGGTCGGG ATCTTCTACTTCATTGGGTTTGGGTTATTCTGTCTTGAATCAGTGGTTAGCEST: gi|124858490|gb|EH942927.1|EH942927
genomic: AGATGTGTTGAGCGCTCAGGCATTGGTCGGGgtaagccctt ... ctttttacagATCTTCTACTTCATTGGGTTTGGGTTATTCTGTCTTGAATCAGTGGTTAGC
EST: GTTGAGCGCTCAGGCATTGGTCGGG ATCTTCTACTTCATTGGGTTTGGGTTATTCTGTCTTGAATCAGTGGTTAGC
genomic: GTTGAGCGCTCAGGCATTGGTCGGGgtaagccctt ... ctttttacagATCTTCTACTTCATTGGGTTTGGGTTATTCTGTCTTGAATCAGTGGTTAGC
gctcctgatcatactatcactcatcgataataccttgtttttttcctttttacagATCTTCTACTTCATTGGGTTTGGGTTATTCTGTCTTGAATCAGTGGTTAGCATCTGGGTTATACAG
tcctgat putative branch site (score: 3)
taccttgtttttttcc putative PPT
tttttttccttttta TA-rich tract