Skip to another splice site:
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 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...aaaccgctattccaattctgtaatcttcgattcatgtagatacaatcttcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC

Basic information

species Arabidopsis thaliana
transcript AT5G66570.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT5G66570.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: LOC_Os01g31690.1 (Oryza sativa), 3'ss of exon 1
---aaaccgctattccaattctgtaatcttcgattcatgtagatacaatct--tcttggatcagtgagtttgattta----aagttgcttgtttctcgtgtaatgaa----------agGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
   | |||   |||   |||  | | | |  | | ||||  |  |    |    |   | |      | | || |||    |  |     |     | |||  ||            |||| || || |||||||| |  || | |||  | ||||  || ||||||||||| ||||| |||||||| ||||| ||||| || ||||| ||||||||||
gtaagaccttaattaggatttaggagtat--gttgcatggcgccatggccaaggccaaggtggaaacgatcgaattactatatatgtaacgccgtgcatgtggtggccggccggtgtagGGCGCCAGCGCGGAGGGCGTGCCGAGGAGGCTTACCTTCGACGAGATTCAGAGTAAGACGTACATGGAGGTGAAGGGAACCGGCACGGCGAACCAGTGCC

upper sequence: AT5G66570.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GRMZM2G113349_T01 (Zea mays), 3'ss of exon 1
-aaaccgctattccaat-tctgtaatcttcga-ttcatgtagatacaatcttcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
  ||     |    |   |   | |||  | |  | | |   |      | |  |   |||   |  | |||  ||    |||  |  | |||||      |||| || || ||||||||  | || |||||  ||||||| || ||||| ||||||||||| ||| |||| ||||| || || || ||||| ||||||||||
gtaagtataagataagcgtgcattatcagcaagcttacgcttacctgtgcctgctcc-tcaacaacgtcgatcgaa----gctgatgacacgtgtgtgcgcagGGCGCGAGCGCGGAGGGCACGCCCAAGAGGCTGACCTACGACGAGATCCAGAGCAAGACGTACCTGGAGGTGAAGGGCACGGGCACGGCGAACCAGTGCC

upper sequence: AT5G66570.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA11G06510.1 (Glycine max), 3'ss of exon 1
aaaccgctattccaattctgtaatc---ttcgattcatgtagatacaatcttcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
|    |        ||| |  ||     |  ||   |  |||| ||||   |  | | |   | ||  |     || ||   | || |    | || | |  |||||||||||| || || | |||||| ||  | ||||  || || || ||||||||||||||| |||||||||| ||||||||||| |||||||||||||
atgttgtgcaatagattatacaagtaaatgggagagaaatagacacaaaaatagttgttatttaagaatagcacaa-gtgattggtgttgtatatattca--gGGAGCAAGTGCAGAAGGTGTTCCAAAAAGGCTAACCTTCGACGAAATCCAGAGCAAGACATACTTGGAAGTGAAGGGAACTGGAACTGCTAACCAGTGCC

upper sequence: AT5G66570.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA01G38750.1 (Glycine max), 3'ss of exon 1
aaaccgctattccaattctgtaatcttcgattcatgtagatacaatcttcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
||     ||    ||    ||||     |   ||        ||      | | | ||   |   |  | | ||       | |  | || ||     ||||||| ||||| || || | |||||||||  | ||||  || || || ||||||||||||||| |||||||||| ||||||||||| ||||| |||||||
aacaaaataagagaaagaagtaagagatgtaacaaaagatggcagggaaatagaaacaaaaatagttgtatgaataacaagggtgattgtatacattcagGGAGCGAGTGCAGAAGGTGTTCCAAAGAGGCTAACCTTCGACGAAATCCAGAGCAAGACATACTTGGAAGTGAAGGGAACTGGAACTGCTAATCAGTGCC

upper sequence: AT5G66570.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: Vv00s0207g00210.t01 (Vitis vinifera), 3'ss of exon 1
---------aaaccgctattccaattctgtaatcttcgattcatgtagatacaatct---tcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
         |  | | ||||   || || |||    | | |  |||   |  ||| |     ||  |    |||  || |   ||| |   ||| || |           ||||||||||||| || |||||||||||| |  |||| || |||||||| ||||| ||||||||||||||||| || ||||||||||| |||||||| ||||
atatttagcatgcagatatt--gatcctataagacactagtgctgttattctaatttatgcttttaacatctgatcttcaagaaaaatattttggttttt----------agGGAGCAAGTGCAGAAGGAGCTCCAAAGCGGCTGACATACGATGAGATCCAGAGTAAGACATACATGGAAGTAAAGGGAACTGGAACTGCTAACCAATGCC

upper sequence: AT5G66570.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: Vv18s0001g11710.t01 (Vitis vinifera), 3'ss of exon 1
aaaccgctattccaatt--ctgtaatcttcgattcatgtagatacaatcttcttggatcag--tgagtttgatttaaagttgcttgtttctcgtgtaatgaa-agGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
 |||    ||   ||||  |   |||    | ||    |  | | | |    ||| || ||  || || | ||||     ||| |    |  |  |||| || |||||||| |||| ||||||| ||| ||| |  | || ||||| || || || ||||||||||||||||||||||||||||| ||||| || ||||||||||
caac--tcatgggaattaaccagaattagagttttccttccaaaaattacatttgtattagcatgtgtgtaatttggcaatgcgta---catggataattaacagGGAGCAGGTGCTGAGGGAGTTCCGAAGCGGCTAACATATGACGAAATCCAAAGCAAGACATACATGGAAGTGAAAGGAACCGGAACTGCAAACCAGTGCC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125192850|gb|EL207804.1|EL207804
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGG
EST: gi|125275259|gb|EL289344.1|EL289344
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGC
EST: gi|47831425|gb|CK121109.1|CK121109
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125081033|gb|EL142414.1|EL142414
EST:     CCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125265842|gb|EL279927.1|EL279927
EST:     CTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124979298|gb|EL052366.1|EL052366
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA
EST: gi|125081889|gb|EL142945.1|EL142945
EST:     CAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCA
genomic: CAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCA
EST: gi|124827647|gb|EH912513.1|EH912513
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCA
EST: gi|47830615|gb|CK120299.1|CK120299
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47828110|gb|CK117794.1|CK117794
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124926468|gb|EL004302.1|EL004302
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACC
EST: gi|124793681|gb|EH883360.1|EH883360
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCC
EST: gi|124797980|gb|EH887659.1|EH887659
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGC
EST: gi|47829219|gb|CK118903.1|CK118903
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125160115|gb|EL187871.1|EL187871
EST:     CTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124958749|gb|EL033471.1|EL033471
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAAGAGATTGACCTATGA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAA-GAGATTGACCTATGA
EST: gi|125140399|gb|EL178670.1|EL178670
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGG
EST: gi|164161363|gb|EL999160.1|EL999160
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGANCAAGTGCGGAGGGANCTCCAAAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAG
EST: gi|124985088|gb|EL057701.1|EL057701
EST:     CCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|164231826|gb|ES014428.1|ES014428
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTC
EST: gi|124770894|gb|EH861024.1|EH861024
EST:     CTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124829400|gb|EH913991.1|EH913991
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCT
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCT
EST: gi|124901631|gb|EH975711.1|EH975711
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAA
EST: gi|125085951|gb|EL145601.1|EL145601
EST:     AATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGA
genomic: AATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGA
EST: gi|47830049|gb|CK119733.1|CK119733
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124719080|gb|EH810482.1|EH810482
EST:     CTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125263619|gb|EL277704.1|EL277704
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGGGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA
EST: gi|125024952|gb|EL097221.1|EL097221
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGAC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGAC
EST: gi|116485292|gb|EG527884.1|EG527884
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124785411|gb|EH875090.1|EH875090
EST:     CCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|116429748|gb|EG472340.1|EG472340
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124806720|gb|EH893375.1|EH893375
EST:     TGTCAAAATCGCCGGATTCGCTCTTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCA
genomic: TGTCAAAATCGCCGGATTCGCTCTT-GCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCA
EST: gi|124720481|gb|EH811883.1|EH811883
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCT
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCT
EST: gi|125106063|gb|EL159643.1|EL159643
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATG
EST: gi|125068417|gb|EL134573.1|EL134573
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAA
EST: gi|47828142|gb|CK117826.1|CK117826
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125273389|gb|EL287474.1|EL287474
EST:     TTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: TTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47832261|gb|CK121945.1|CK121945
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47830130|gb|CK119814.1|CK119814
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125107043|gb|EL160432.1|EL160432
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGG
EST: gi|125239477|gb|EL253562.1|EL253562
EST:     CTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47830100|gb|CK119784.1|CK119784
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124885860|gb|EH964762.1|EH964762
EST:     CCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGAACCTATGATGAGATTCA
genomic: CCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA-CCTATGATGAGATTCA
EST: gi|116457079|gb|EG499671.1|EG499671
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125026318|gb|EL098587.1|EL098587
EST:     GGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATT
genomic: GGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATT
EST: gi|116472048|gb|EG514640.1|EG514640
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125069932|gb|EL135531.1|EL135531
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGACAAAGTGCGGAGGGAGCTCCAAAGAGATTGAC
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAG-CAA-GTGCGGAGGGAGCTCCAAAGAGATTGAC
EST: gi|47829694|gb|CK119378.1|CK119378
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125116823|gb|EL166209.1|EL166209
EST:     CAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAAGATTGACCTATGATGAGATTCA
genomic: CAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGA-GATTGACCTATGATGAGATTCA
EST: gi|47829695|gb|CK119379.1|CK119379
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47831233|gb|CK120917.1|CK120917
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47829770|gb|CK119454.1|CK119454
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124890892|gb|EH969794.1|EH969794
EST:     CTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125046240|gb|EL118509.1|EL118509
EST:     CCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTACA
genomic: CCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATT-CA
EST: gi|47829717|gb|CK119401.1|CK119401
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47832296|gb|CK121980.1|CK121980
EST:     GTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: GTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47829686|gb|CK119370.1|CK119370
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47832254|gb|CK121938.1|CK121938
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47831239|gb|CK120923.1|CK120923
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125190195|gb|EL205149.1|EL205149
EST:     AAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: AAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47831845|gb|CK121529.1|CK121529
EST:     CTGTCAAAATCGCCGGATTCTCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124896142|gb|EH972356.1|EH972356
EST:     TGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTACTCGTCGTCTCG                         GGAGCAAGTGCGGAGG
genomic: TGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCT-CTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGG
EST: gi|124912444|gb|EH986524.1|EH986524
EST:     CCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAA
genomic: CCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAA
EST: gi|124971027|gb|EL044821.1|EL044821
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAG
EST: gi|125111857|gb|EL163169.1|EL163169
EST:     TCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: TCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124866064|gb|EH950501.1|EH950501
EST:     CCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCCCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124794529|gb|EH884208.1|EH884208
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGNGCTCCAAAGAGATTGACCTATGAT
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGAT
EST: gi|124745625|gb|EH836437.1|EH836437
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGA
EST: gi|125046475|gb|EL118744.1|EL118744
EST:     CTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124749418|gb|EH839548.1|EH839548
EST:     CTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGNGATTCAG
genomic: CTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125302404|gb|EL316489.1|EL316489
EST:     CCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAAGAGATTGACCTATGATGAGATTCA
genomic: CCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAA-GAGATTGACCTATGATGAGATTCA
EST: gi|124847616|gb|EH932053.1|EH932053
EST:     CGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125267393|gb|EL281478.1|EL281478
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAG
EST: gi|124807729|gb|EH894133.1|EH894133
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGA
EST: gi|47829798|gb|CK119482.1|CK119482
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|47830091|gb|CK119775.1|CK119775
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125318403|gb|EL332488.1|EL332488
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAG
EST: gi|125135062|gb|EL175591.1|EL175591
EST:     CTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125099687|gb|EL155410.1|EL155410
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGA
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGA
EST: gi|125029505|gb|EL101774.1|EL101774
EST:     TCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: TCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|125019354|gb|EL091623.1|EL091623
EST:     CCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124892568|gb|EH971470.1|EH971470
EST:     TCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGAT
genomic: TCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGAT
EST: gi|47832175|gb|CK121859.1|CK121859
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124775884|gb|EH866011.1|EH866011
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCT
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCT
EST: gi|47830757|gb|CK120441.1|CK120441
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
EST: gi|124874044|gb|EH955689.1|EH955689
EST:     TGTCAAAATCGCCGGTATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA
genomic: TGTCAAAATCGCCGG-ATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGA
EST: gi|125149911|gb|EL182845.1|EL182845
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAG
EST: gi|124908236|gb|EH982316.1|EH982316
EST:     CTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATAGATGAGATTCA
genomic: CTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTAT-GATGAGATTCA
EST: gi|116433073|gb|EG475665.1|EG475665
EST:     CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCG                         GGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG
genomic: CTGTCAAAATCGCCGGATTCGCTCTTGCCACCTCTGCTCTCGTCGTCTCGgtaactttct ... gtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcttcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC
                 gtttgat  putative branch site (score: 5)
                  tttgatttaaagtt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
aaaccgctattccaattctgtaatcttcgattcatgtagatacaatcttcttggatcagtgagtttgatttaaagttgcttgtttctcgtgtaatgaaagGGAGCAAGTGCGGAGGGAGCTCCAAAGAGATTGACCTATGATGAGATTCAGAGCAAGACATACATGGAAGTGAAAGGAACTGGAACGGCTAACCAGTGCC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGGAA
aaaccgc
- - - - attccaa
- - - - - - - - - - - - - - - - - - - gatacaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -agtttga