1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaagacttaataatcaaaagctcgaatttttaatgttcttccaatcattgaaatataatccgagattaaagtttttaaatttgatcttgattggtgtgtaaagTCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGATTCTGATGACTGGCAAGGTGATTTCTTCCCTGAAATCCCCAAGATTAAGT
species | Arabidopsis thaliana |
transcript | AT5G57655.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTGAGTTTTTTATGCTCCTTCTCTGCTTCATCGCAGCGTCATCTCTAGTG TCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGATEST: gi|116424348|gb|EG466940.1|EG466940
genomic: TTGAGTTTTTTATGCTCCTTCTCTGCTTCATCGCAGCGTCATCTCTAGTGgtaagactta ... gtgtgtaaagTCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGAT
EST: TTGAGTTTTTTATGCTCCTTCTCTGCTTCATCGCAGCGTCATCTCTAGTG TCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGATEST: gi|301501388|gb|HO206928.1|HO206928
genomic: TTGAGTTTTTTATGCTCCTTCTCTGCTTCATCGCAGCGTCATCTCTAGTGgtaagactta ... gtgtgtaaagTCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGAT
EST: TTGAGTTTTTTATGCTCCTTCTCTGCTTCATCGCAGCGTCATCTCTAGTG TCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGAT
genomic: TTGAGTTTTTTATGCTCCTTCTCTGCTTCATCGCAGCGTCATCTCTAGTGgtaagactta ... gtgtgtaaagTCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGAT
tgaaatataatccgagattaaagtttttaaatttgatcttgattggtgtgtaaagTCTGCTGATCCACCAACATGTCCTGCTGATTTGGGAGGCAAGTGTAGTGATTCTGATGACTGGCAAGGTGATTTCTTCCCTGAAATCCCCAAGATTAAGT
tcttgat putative branch site (score: 4)
attaaagtttttaaat TA-rich tract