1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
gtaacaaatttctacaatgaaaagcttcaaatcccctgattcatttgattcgatttccattagggtttatgttttgattttgctccaatttcttctacagACGTATATGTTCAAGCTCTTGAATAGTAGCGGTATCACAGAATCTGGTGAAAGTGAGAAAGTTTTGCTTTTAATGGAAAGTGGTGTTCGTTTACATACCA
species | Arabidopsis thaliana |
transcript | AT5G49930.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: AGCGATTAATCGGTATGAGATGCTCCAACGTCTATGATATATCTCCCAAG ACGTATATGTTCAAGCTCTTGAATAGTAGCGGTATCACAGAATCTGGTGAA
genomic: AGCGATTAATCGGTATGAGATGCTCCAACGTCTATGATATATCTCCCAAGgtaacaaatt ... tcttctacagACGTATATGTTCAAGCTCTTGAATAGTAGCGGTATCACAGAATCTGGTGAA
tgattcgatttccattagggtttatgttttgattttgctccaatttcttctacagACGTATATGTTCAAGCTCTTGAATAGTAGCGGTATCACAGAATCTGGTGAAAGTGAGAAAGTTTTGCTTTTAATGGAAAGTGGTGTTCGTTTACATACCA
ttttgat putative branch site (score: 4)
ctccaatttcttct putative PPT
tttatgttttgatttt TA-rich tract