1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtttacttgttttctcttctctttccttcagtaaagtcgtttccttgatctgctctttatggcttagctaccaaaatttgcaaaggtcctttactcgctgctcaatctcgatagcttcatttttcagTTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCCAGGAATTTCAAGGGTTTTGTTCTTACAGCCCAGTATTCGCAAACTCAGG
species | Arabidopsis thaliana |
transcript | AT5G05200.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAG TTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCCEST: gi|152035496|gb|BP854753.2|BP854753
genomic: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAGgtttacttgt ... catttttcagTTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCC
EST: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAG TTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCCEST: gi|116393018|gb|EG435610.1|EG435610
genomic: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAGgtttacttgt ... catttttcagTTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCC
EST: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAG TTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCCEST: gi|47832248|gb|CK121932.1|CK121932
genomic: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAGgtttacttgt ... catttttcagTTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCC
EST: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAG TTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCC
genomic: CGGTCTCAGCTTTCCGTGGCACGCGGTTACCGTTATTTCACCATTCTCAGgtttacttgt ... catttttcagTTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCC
aaaatttgcaaaggtcctttactcgctgctcaatctcgatagcttcatttttcagTTTCCCGTCGCGAGAACTGTGTCAGGAACGTCTAAGAAGATGATCGGAGCCAGGAATTTCAAGGGTTTTGTTCTTACAGCCCAGTATTCGCAAACTCAGG
cttcatttttc CT-rich tract
ttcattttt TA-rich tract