Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|301502185|gb|HO207725.1|HO207725EST: AATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: AATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|47830620|gb|CK120304.1|CK120304EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|47829540|gb|CK119224.1|CK119224EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTTTCACGAGGAATCGTACC
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|124981963|gb|EL054800.1|EL054800EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTG
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTG
EST:
gi|124891807|gb|EH970709.1|EH970709EST: TGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: TGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|47829696|gb|CK119380.1|CK119380EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|47828628|gb|CK118312.1|CK118312EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTTTCACGAGGAATCGTACC
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|125201233|gb|EL216187.1|EL216187EST: CAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: CAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|124904443|gb|EH978523.1|EH978523EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|301502606|gb|HO208146.1|HO208146EST: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
genomic: CCAGCTCCGACGGAAGCTCTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACC
EST:
gi|124715282|gb|EH806684.1|EH806684EST: CTTTTCCTTCTCAACGGCAAATGGATCCTCGC CTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTAAC
genomic: CTTTTCCTTCTCAACGGCAAATGGATCCTCGCgtaagttttt ... tcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTA-C
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ggattcaaatggtagatctcgtgctgcttttgatttggttaaacctcttttgcagCTACACATCGTTCGTGAATTTGTTCCCGTTGCTATCACGAGGAATCGTACCGTTAATAAAAGTCGATGAGATCTCTCAAACCATTGATTCAGATAACTTC
ttttgat putative branch site (score: 4)
cctcttttgc putative PPT
ttttgattt TA-rich tract