1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
gtaatgagtaaaatctatgagcttttgctttatcttcgaatctaagatcaggaattgatcagggtttttacccaatttcgataattgtcttcttcgctggattgatttttgttctggaattgtttatcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCTCATCGCAATGATCGCCGATGAG
species | Arabidopsis thaliana |
transcript | AT4G02620.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018455|gb|DR314201.1|DR314201
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|164189721|gb|ES125110.1|ES125110
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGNG TTGAATCAAATATGGEST: gi|86018467|gb|DR314213.1|DR314213
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGG
EST: ATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|116395092|gb|EG437684.1|EG437684
genomic: ATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTEST: gi|86018442|gb|DR314188.1|DR314188
genomic: GAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCT
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018460|gb|DR314206.1|DR314206
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018443|gb|DR314189.1|DR314189
genomic: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018454|gb|DR314200.1|DR314200
genomic: GAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018463|gb|DR314209.1|DR314209
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|125294365|gb|EL308450.1|EL308450
genomic: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGEST: gi|86018451|gb|DR314197.1|DR314197
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGG
EST: GAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|124999957|gb|EL072226.1|EL072226
genomic: GAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTEST: gi|86018447|gb|DR314193.1|DR314193
genomic: GGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACT
EST: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018456|gb|DR314202.1|DR314202
genomic: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018466|gb|DR314212.1|DR314212
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCDCAACTCTGCCCEST: gi|86018458|gb|DR314204.1|DR314204
genomic: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: AATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018457|gb|DR314203.1|DR314203
genomic: AATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018461|gb|DR314207.1|DR314207
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|125154180|gb|EL184924.1|EL184924
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATEST: gi|125030723|gb|EL102992.1|EL102992
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGAT
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGEST: gi|86018462|gb|DR314208.1|DR314208
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAG
EST: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018450|gb|DR314196.1|DR314196
genomic: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|164116708|gb|ES105405.1|ES105405
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCEST: gi|164221944|gb|ES160630.1|ES160630
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCC
EST: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAACCAAATATGGCTGGGAGAGCTACGAEST: gi|86018444|gb|DR314190.1|DR314190
genomic: ATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGA
EST: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|124983053|gb|EL055811.1|EL055811
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: ACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|124958059|gb|EL032833.1|EL032833
genomic: ACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGEST: gi|86018453|gb|DR314199.1|DR314199
genomic: GAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTG
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86075878|gb|DR371635.1|DR371635
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGWACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018449|gb|DR314195.1|DR314195
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018464|gb|DR314210.1|DR314210
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|124935843|gb|EL012795.1|EL012795
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATAEST: gi|86018452|gb|DR314198.1|DR314198
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATA
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|125258056|gb|EL272141.1|EL272141
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGEST: gi|164030314|gb|ES124022.1|ES124022
genomic: GAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCG
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGEST: gi|86018459|gb|DR314205.1|DR314205
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGG
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|125239327|gb|EL253412.1|EL253412
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGEST: gi|86018448|gb|DR314194.1|DR314194
genomic: GAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTG
EST: AAATCAAATCGAAGAAGGAGAGAAGAACATAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|47828671|gb|CK118355.1|CK118355
genomic: AAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018445|gb|DR314191.1|DR314191
genomic: GAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|86018465|gb|DR314211.1|DR314211
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCEST: gi|164202017|gb|ES097945.1|ES097945
genomic: TCTATCTATCAAATCAAATCGAAGAAGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCC
EST: GGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCEST: gi|125122425|gb|EL169055.1|EL169055
genomic: GGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTC
EST: AGGAGAGAAGAACAGAGAAAAAGAG TTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAA
genomic: AGGAGAGAAGAACAGAGAAAAAGAGgtaatgagta ... tcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAA
taattgtcttcttcgctggattgatttttgttctggaattgtttatcgtgtgtagTTGAATCAAATATGGCTGGGAGAGCTACGATCCCTGCTCGCAACTCTGCCCTCATCGCAATGATCGCCGATGAG
gattgat putative branch site (score: 4)
attgattttt TA-rich tract