Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgaattgtgtgattctgttcattttgttctttcaatggatttatcgtattggaactgttttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA

Basic information

species Arabidopsis thaliana
transcript AT3G53870.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: AT3G53870.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA10G26890.1 (Glycine max), 3'ss of exon 1
gtgaattgtgtgattctgtt-cattttgttctt-tcaatgga--------tttatcgtattggaactgttttggtaactgtgt----tgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
|||| | | | || | | | |||| || | ||| | |||| | | || | | | || | || || | | |||| ||||| || || ||||||| ||||||| |||| |||||||| ||||||||| | || ||||| |||||||| || || || ||||||||||| || |
gtgactcactcattcataccacaatcagccttcaccaattgaaattaaacctcatcaattaataactatgatttcaattttttatcgtgtgtttctgtgtgcgcagTTCGTAGCTGATGGAGTGTTCTTCGCTGAACTGAACGAGGTTCTGACAAGAGAGTTGGCCGAGGACGGTTACTCCGGCGTGGAAGTTAGGGTTACGCCGA

upper sequence: AT3G53870.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA10G26790.1 (Glycine max), 3'ss of exon 1
gtgaattgtgtgattctgttcattttgttctt--tcaatgga--------tttatcgtattggaactgt---tttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
|||| | | | | | ||| |||| || | ||| | |||| | || | | | || | || || | | |||| ||||| || || ||||||| ||||||| |||| |||||||| ||||||||| | || ||||| |||||||| || || || ||||||||||| || |
gtgactcactcattcataccacaatcatccttcaccaattgaaattaaacctcatcaattaataactataatttcaatttttatcgtgtgtttctgtgtgcgcagTTCGTAGCTGATGGAGTGTTCTTCGCTGAACTGAACGAGGTTCTGACAAGAGAGTTGGCCGAGGACGGTTACTCCGGCGTGGAAGTTAGGGTTACGCCGA

upper sequence: AT3G53870.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA20G21190.1 (Glycine max), 3'ss of exon 1
gtgaattgtgtgattct--gttcattttgttc--tttcaatggatttatcgtattggaactgttttggtaactgtgt--tgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
|||| | | || | | || | || |||| || || | | ||| | | | | || | ||||| | | |||| ||||| || || ||||||| ||||||| |||| |||||||| ||||| ||| |||| ||||| || ||||| || || || ||||||||||| || |
gtgactcactcattcctcaatcaaccttcaccaattgcaattgaccacatcaatagctaacatttcaattgttttttcgtgtgtttttgtgtgcgcagTTCGTAGCTGATGGAGTGTTCTTCGCTGAACTGAACGAGGTTCTGACAAGGGAGTTAGCCGAGGACGGATACTCCGGCGTGGAAGTTAGGGTTACGCCGA

upper sequence: AT3G53870.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA09G28440.1 (Glycine max), 3'ss of exon 1
gtgaattgt---gtgattctgttcattttgttctttcaatggatttatcgtatt-ggaactgttttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
|| | | || ||| ||| | ||||| | ||| | | | ||| || || | || || |||| | | || | | | || ||||||| ||||| || ||||||| ||| ||| |||| |||||||| ||| | ||| | || ||||| |||||||| || || |||||||||||||| || |
gtcagtggtacaatgaatctatgaatttt--tattttattttttctattgtgtttgaaagtgaaactgtaaattgaatagtgttattaatgtgcagTTTGTGGCGGATGGAGTGTTCTTCGCCGAACTGAACGAGGTTCTGACACGTGAGTTGGCGGAGGACGGTTACTCCGGCGTGGAGGTTAGGGTTACGCCGA

upper sequence: AT3G53870.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: GLYMA16G33240.1 (Glycine max), 3'ss of exon 1
-------------------gtgaattgtgtgat--tctgttcat-tttgttctttcaatggatttatcgtattggaactgttttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
| || | || ||| || | ||| || |||| || | || | | ||| | || | | | | || |||||||||| |||||||| ||||||| ||| ||| |||| |||||||| ||| | || | || ||||| |||||||| || || || ||||||||||| || |
gtaagtgctagagagaatcgaaaacagcagcattttctatttgtgtttattttttcttcattcttgttgtgtatgtga-atttgaacatttgaatggcgttaatg----tgtagTTTGTTGCGGACGGAGTGTTCTTCGCCGAACTGAACGAGGTTCTGACACGTGAATTGGCGGAGGACGGTTACTCCGGCGTGGAAGTTAGGGTTACGCCGA

upper sequence: AT3G53870.1 (Arabidopsis thaliana), 3'ss of exon 1
lower sequence: Vv11s0016g01380.t01 (Vitis vinifera), 3'ss of exon 1
--------gtgaattgtgtgattctgttcattttgtt---ctttcaatggatttatcgtattgga-actgttttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
| || | | ||| | | ||| | || |||| | | | || | | |||| ||||||| | || | ||| | || |||| ||||| || || || |||| ||||| |||| |||||||| || |||||||| || |||||||| ||||||||||| |||||||||||||| || |
gtctgatcatatgttcttttattttcctttgttttctgagctaccaatcggaaagttatgtttgttaaagtttcggtaact-tattttgttttc--tcttacagTTCGTAGCTGATGGAGTTTTCTTTGCTGAGCTGAACGAGGTTCTCACCAGAGAGCTGGCCGAGGATGGCTACTCTGGTGTCGAGGTTAGGGTTACGCCAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|125136244|gb|EL176274.1|EL176274
EST:     ACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: ACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|124891327|gb|EH970229.1|EH970229
EST:     CAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: CAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86064308|gb|DR360065.1|DR360065
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|124755116|gb|EH845246.1|EH845246
EST:     ATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTAC
genomic: ATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTAC
EST: gi|116450432|gb|EG493024.1|EG493024
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|47829794|gb|CK119478.1|CK119478
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|47832087|gb|CK121771.1|CK121771
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86064329|gb|DR360086.1|DR360086
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86067841|gb|DR363598.1|DR363598
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|116410822|gb|EG453414.1|EG453414
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|124857148|gb|EH941585.1|EH941585
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCT
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCT
EST: gi|86064321|gb|DR360078.1|DR360078
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|125218315|gb|EL232398.1|EL232398
EST:     TGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: TGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|125200536|gb|EL215490.1|EL215490
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTAC
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTAC
EST: gi|86067838|gb|DR363595.1|DR363595
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86067839|gb|DR363596.1|DR363596
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGGGNGTTCTACGCTGAATTGAATGAGGNTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86064275|gb|DR360032.1|DR360032
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|152035033|gb|BP842662.2|BP842662
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|116445202|gb|EG487794.1|EG487794
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|125062572|gb|EL130868.1|EL130868
EST:     CGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTT
genomic: CGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTT
EST: gi|86064306|gb|DR360063.1|DR360063
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86067837|gb|DR363594.1|DR363594
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|124968714|gb|EL042653.1|EL042653
EST:     ATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: ATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86064276|gb|DR360033.1|DR360033
EST:     AGATTCTCACATTTGCAAACATGACGACTCANATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86064291|gb|DR360048.1|DR360048
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|116449038|gb|EG491630.1|EG491630
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|164157145|gb|ES105079.1|ES105079
EST:     GCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: GCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86064325|gb|DR360082.1|DR360082
EST:     AGATTCTCACATTTGCAAACATGRCGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|116454700|gb|EG497292.1|EG497292
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
EST: gi|86067836|gb|DR363593.1|DR363593
EST:     AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAG                         TTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA
genomic: AGATTCTCACATTTGCAAACATGACGACTCAGATCAGCAAGAAGAGAAAGgtgaattgtg ... gattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ggatttatcgtattggaactgttttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA
                                        attttgattttgta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgaattgtgtgattctgttcattttgttctttcaatggatttatcgtattggaactgttttggtaactgtgttgagattttgattttgtagTTTGTAGCGGACGGTGTGTTCTACGCTGAATTGAATGAGGTTCTTACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCTA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG