1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaaccaaaactctctcttcttcacaaggttctatgtttatgtccttaaagtatcgatttttacattgatcgatggtttgtgttttgctttatgaagAGCCTCAGAAAAGTATTCATGAGATAGCTAAGACTTTGGTTGGTTCTAAACTTCCTGTAAAG
species | Arabidopsis thaliana |
transcript | AT3G23700.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGTGGGTTTTCTTCCTTATCCACAATTAAGTCCTTCCCGTTCTTGTAAAG AGCCTCAGAAAAGTATTCATGAGATAGCTAAGACTTTGGTTGGTTCTAAACEST: gi|124856440|gb|EH940877.1|EH940877
genomic: TGTGGGTTTTCTTCCTTATCCACAATTAAGTCCTTCCCGTTCTTGTAAAGgtaaccaaaa ... ctttatgaagAGCCTCAGAAAAGTATTCATGAGATAGCTAAGACTTTGGTTGGTTCTAAAC
EST: TATCCACAATTAAGTCCTTCCCGTTCTTGTAAAG AGCCTCAGAAAAGTATTCATGAGATAGCTAAGACTTTGGTTGGTTC
genomic: TATCCACAATTAAGTCCTTCCCGTTCTTGTAAAGgtaaccaaaa ... ctttatgaagAGCCTCAGAAAAGTATTCATGAGATAGCTAAGACTTTGGTTGGTTC
tccttaaagtatcgatttttacattgatcgatggtttgtgttttgctttatgaagAGCCTCAGAAAAGTATTCATGAGATAGCTAAGACTTTGGTTGGTTCTAAACTTCCTGTAAAG
cattgat putative branch site (score: 4)
ttttgcttt putative PPT
atttttacattgat TA-rich tract