1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtagtttaataatgatcttatggaaaaactctgctcttacttatgaatttgtgaactagttaggatttagtaaattagagatattagtaatagcttgagttactgtttgtccatgaagcttgtgaaattgtggatgcctttggatcttactagtgtgtctctatgtaatattagCTTTAGAGAGATTCACTGTAGTGTCGTACAACATATTGGGAGATGGAAATTCATCATATCACAGAGAGTTGTACTCCAATGTGTCTGTTCCTTACCTCAA
species | Arabidopsis thaliana |
transcript | AT3G18500.3 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAGATGCAACTCCAGTTTCTCAAG CTTTAGAGAGATTCACTGTAGTGTCGTACAACATATTGGGAGATGGAAATTEST: gi|86069738|gb|DR365495.1|DR365495
genomic: CAGATACAACTCCAGTTTCTCAAGgtagtttaat ... gtaatattagCTTTAGAGAGATTCACTGTAGTGTCGTACAACATATTGGGAGATGGAAATT
EST: TCAGATTGCTCGTGATTGGATCGATTCAGATACAACTCCAGTTTCTCAAG CTTTAGAGAGATTCACTGTAGTGTCGTACAACATATTGGGAGATGGAAATT
genomic: TCAGATTGCTCGTGATTGGATCGATTCAGATACAACTCCAGTTTCTCAAGgtagtttaat ... gtaatattagCTTTAGAGAGATTCACTGTAGTGTCGTACAACATATTGGGAGATGGAAATT
ttgtgaaattgtggatgcctttggatcttactagtgtgtctctatgtaatattagCTTTAGAGAGATTCACTGTAGTGTCGTACAACATATTGGGAGATGGAAATTCATCATATCACAGAGAGTTGTACTCCAATGTGTCTGTTCCTTACCTCAA
atcttac putative branch site (score: 3)
tctatgtaatatta TA-rich tract