1 5' 3' | 2 5' 3' |
gtttgtcttttgtatcatttcacactatcaaatggagaagacaaaaaccttcttttttcctcactatcaatgggtctgcaacaatgtagattacttgctgataattttgaaatctgaatcaacaaagtcaaaatctttctaagcaaaattacaaatttgatgaacttgttggatggttgttttcagATTACCAGTGGAGTTGAGCTCGATGATACCTCTGCACAGTGCTATAGCATCGTCCAGGCTCGTCTCAAGTTTGTCCGTTGAATCCAAAATCTGGGGATTA
species | Arabidopsis thaliana |
transcript | AT3G13674.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCGATCTTCAAG ATTACCAGTGGAGTTGAGCTCGATGATACCTCTGCACAGTGCTATAGCATC
genomic: TCGATCTTCAAGgtttgtcttt ... ttgttttcagATTACCAGTGGAGTTGAGCTCGATGATACCTCTGCACAGTGCTATAGCATC
aatctttctaagcaaaattacaaatttgatgaacttgttggatggttgttttcagATTACCAGTGGAGTTGAGCTCGATGATACCTCTGCACAGTGCTATAGCATCGTCCAGGCTCGTCTCAAGTTTGTCCGTTGAATCCAAAATCTGGGGATTA
atttgat putative branch site (score: 5)
ttgttttc putative PPT
aaaattacaaatttga TA-rich tract