1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gttctctctctctctccctctctctgcttagagattttagatgtagtagtaatagtttaacaggagagtgaagatgtcaagaggtgttgagatgattgattagatctttgaataaacaaatatgtgtatgaattggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCCCATCTTCTTCGTCTTCTCCCAAAGCTCTGGTTTTCCTCTGCCATG
species | Arabidopsis thaliana |
transcript | AT2G47630.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAAWTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCEST: gi|86040705|gb|DR336460.1|DR336460
genomic: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
EST: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCEST: gi|86040708|gb|DR336463.1|DR336463
genomic: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
EST: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCEST: gi|86040701|gb|DR336456.1|DR336456
genomic: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
EST: TGAAGTCGTCGGAATTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCEST: gi|86040707|gb|DR336462.1|DR336462
genomic: TGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
EST: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCEST: gi|124820912|gb|EH905778.1|EH905778
genomic: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
EST: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCAEST: gi|86040702|gb|DR336457.1|DR336457
genomic: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCA
EST: CTCAAGATCTAGCTCCGGTCATGAAKTCGTCGGAATTCCAATACCACGAG GAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
genomic: CTCAAGATCTAGCTCCGGTCATGAAGTCGTCGGAATTCCAATACCACGAGgttctctctc ... ttggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATC
tgagatgattgattagatctttgaataaacaaatatgtgtatgaattggtgacagGAATACGTGAGAAATTCAAGAGGTGTAGAGTTGTTCGCATGTAGATGGATCCCATCTTCTTCGTCTTCTCCCAAAGCTCTGGTTTTCCTCTGCCATG
gattgat putative branch site (score: 4)
tttgaataaacaaata TA-rich tract