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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaattactggttgcatttatatatgttcattgattctaagtgccgatgtatccggttagattttgattatgttttgggtgattctgtttttttttctcttaagttaattctgttgattttatgtttcctttcttgatagATCTATTGATGGGAGACTACGATTTCTCTTTTACAGTGCCCTCGGTGTG

Basic information

species Arabidopsis thaliana
transcript AT2G34100.2
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tgtttttttttctcttaagttaattctgttgattttatgtttcctttcttgatagATCTATTGATGGGAGACTACGATTTCTCTTTTACAGTGCCCTCGGTGTG
                          tgttgat  putative branch site (score: 4)
                                ttttatgtttcctttc  CT-rich tract
                            ttgattttatgttt  TA-rich tract