1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtaagtcttatcactttaaagccgtttttttctttggatttttggttaattttatccttattgtcagtattgatagttgggttttggttttgtgttttagtcgaatatccttaatttagaagtgttcttttacttttacttgttatatatggtcgtgtacagTTTGATACGAAATACTACTACGAAATTGGGAGTGGCAAGTGGTCCAGACGGTTCTGGTTCTTTATCCCGCCTAAATCAGGCCCTGACGTACCTTACACAT
species | Arabidopsis thaliana |
transcript | AT2G27190.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TTAATTACACGTCTGGTTATATTCACCATTGCCTCATCGATGATTTGGAA TTTGATACGAAATACTACTACGAAAEST: gi|86021684|gb|DR317430.1|DR317430
genomic: TTAATTACACGTCTGGTTATATTCACCATTGCCTCATCGATGATTTGGAAgtaagtctta ... tcgtgtacagTTTGATACGAAATACTACTACGAAA
EST: TTAATTACACGTCTGGTTATATTCACCATTGCCTCATCGATGATTTGGAA TTTGATACGAAATACTACTACGAAATTGGGAGTGGCAAGTGGTCCAGACGG
genomic: TTAATTACACGTCTGGTTATATTCACCATTGCCTCATCGATGATTTGGAAgtaagtctta ... tcgtgtacagTTTGATACGAAATACTACTACGAAATTGGGAGTGGCAAGTGGTCCAGACGG
tccttaatttagaagtgttcttttacttttacttgttatatatggtcgtgtacagTTTGATACGAAATACTACTACGAAATTGGGAGTGGCAAGTGGTCCAGACGGTTCTGGTTCTTTATCCCGCCTAAATCAGGCCCTGACGTACCTTACACAT
ccttaat putative branch site (score: 4)
ttttacttttacttgt TA-rich tract